Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00121 ATGGAGGGAACTTCTAATATTTGTTCCAAGGAAGAGAGCGTTGATTTGACCCAAATCTCTCTCCGACCCCTTCAGCTTTCTGACCTTGATGATGTCATGGTGTGGAGCACTGATGAAAAAGTGGCTAGGTTTTGCTCTTGGGAACCTAGCACCAGCAAAGACGATAGCATTAACTTCATTGAAAGTATACCTACCAAATTTCTATGGTGCAAAGCAATATGCCTCAACGATCGTGCTATTGGATGTATTTCTCTGTCTTCGTATGCAGCCCATGATAAACTAAGGAACAAATCAGCGGAACTAGGCTATGTTCTGGGATCCAAATACTGGGGGAAAGGGATTGTCACGCATGCTGTGAAACAAGTGGTTAAGGCTGCATTCAGTGAGTTGCCACACTTGGAGAGGCTTGAAGCTCTCGTTGATGTGGAAAATGTTGGCTCTCAGAGAGTGCTGGACAAGGTTGGTTTCCAGAGGGAAGGAGTTCTCAGAAAGTATGTGTTCATGAAGGGGAAAAGCAAAGATATGGTCATGTTCAGTGTTCTTTCAACCGTGATTTGA 558 0.4427 MEGTSNICSKEESVDLTQISLRPLQLSDLDDVMVWSTDEKVARFCSWEPSTSKDDSINFIESIPTKFLWCKAICLNDRAIGCISLSSYAAHDKLRNKSAELGYVLGSKYWGKGIVTHAVKQVVKAAFSELPHLERLEALVDVENVGSQRVLDKVGFQREGVLRKYVFMKGKSKDMVMFSVLSTVI. 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00121 185 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 12 183 - -
Seca10g00121 185 Pfam Acetyltransferase (GNAT) domain 20 157 IPR000182 GO:0016747
Seca10g00121 185 Gene3D - 12 184 - -
Seca10g00121 185 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 19 182 IPR000182 GO:0016747
Seca10g00121 185 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 19 181 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00121 Seca-Chr10 1137488 1138045 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca10g00121 Acetyltransf_3 4.5e-27 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00121 - - gmx:100527055 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g00121 10 1137488 1138045 Seca10g00121 10 1137488 1138045 ECH