Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00097 ATGTTTCTGTTCCTTCTATGCTCCTCCCATGTTCTAGGGAAGGCTAACTCAATTGAACTGGGTTCCAGCATTGTGGCTGGCACTAACTCATCTTGGAAATCACCCTCTGGTGATTATGCCTTTGGGTTCTACCGCCTTGTAACTGGTCTCTATCTTGTTGGAATTTGGTTTGACAAGATTCCACAAAATACTCTGGTTTGGTCTGCAAACCGTGACAATCCTGTTGAAATTGGATCAACAGTCAATCTTACACTCAGTGGCCAACTTGTGCTCCAACATGTCAATGGGACTTCATCTCCAATCTATAACGGAACAGACACAACTTCTGTTGTGATGCAGGATGATGGAAATTTTATCTTGATAAATTCAGTTTCCAACATTATCTGGCAGAGCTTTGATTCACCCACAGATACACTTCTATTAGGACAAACTCTGGATATGAATCAGATGCTTTGCTCCAATGCCAACGGAACAGTAGACTACTCAACTGGAAAATACAAATTGGAGATCCAAAAACCTGGTGGCAGCATTCTCCTCACAGCTTCTCAGTTCCAGGATAATGCTTATTGGAATTGGTGGAGTGGACCTACCGGTCAAAAAAATGTGAGAATTATTTTTGACAACACAACAGCTTTTCTTTACGCTGTCAATAGCACCCAAATTATATATAATATGACAACTGAAGCTAGGAATCCAATCAAAGATTATTACTACCGTGTAGTGATTGATGACCAAGGAAACTTGCAGAAATGGATTTATCATAAAGAAAATGGAGTTCAGTGGACATCTATATGGAAGGCAGTAGCAGAACCCTGCAAAGTGACTGCCATTTGTGGGGTATATAGCTTTTGCAATTCATCTGATTCTAGTACATTCAGTTGTGACTGCTTGCCTGGCTATGCACCTTTTGATCCAAGTGATCCTTCCAAAGGGTGCTATCCTAATGTAGTTAGGGACTTGTGTGCAGCAAATTCCTCTGCATCAGACTTTACAATGGAAGTGGAACCAGTTCAAGGTGTTGATATACCAAACGGAGAATATACTTATGCTGATCTACAGGTCAAAACTAATTCCGATCTGGAAAGCTGCAAGAGGGAACTGATGAATGATTGTTTCTCCATAGCTGCTGTTTTAGTTGATAACACTGCTTGTGTCAAGAAAAGGACGCCTATTATAAATGCCAGACCAAGCATCCTTGCCACTGACTATCGTGAAGCACTAACACTGATTAAAGTTCCTCGAGTCCACACACACAATGATAAGGATTCACCCTCTTGGGTTGTTTTGCTAGTGGCTCTTATCTCGTGCTCCCTACTTGCTGCTTTGTTTGCAGTTACTGCCACTTATCATCACCCCGTTTATGGATATCTGATACATAAACGGGCACCACCAAAGCCAAGAACCGTGGATGTGGATATCCATGTAAAAGCATTCTCATACCAACATCTGAGGGAAGCAACAAATGGATTCAAGGAAATACTTGGCCGAGGTTCCTTTGGTACTGTCTATAGTGGGGTTCTAGCCTTTGGAGGTGAACAGGTTGAGGTTGCTGTCAAACAACTGGAGCAGGTAGAACTGGAAGAACAAGGTGAGAAAGAATTTGTGACAGAAGTTCAGGTGATTGCTCTGACTCATCATAGAAATCTTGTTAGGTTATTGGGCTTTTGCAATGAGCAGAACCATCGGCTTCTGGTTTATGAGAAAATGAAAAATGGGACACTGTTCAAGTTTCTTTTTGGAGAAGGGGTTGGTAAACCCAGTTGGGAATGTAGAGCCAGAATTGTTGTTGAAATTGCTAAAGGCTTATTATATCTGCATGAAGAGTGTGACCACCAAATCATCCATTGTGACATAAAGCCACAGAATGTTCTTCTTGACTCAAACTATAGTGCAAAAATATCAGATTTTGGTCTAGCAAAGCTACTAATGAAGGATGGAACTCGATCAAGCACCCAGTCCCATGCTAGAGGAACAATGGGATATATGGCACCAGAATGGCTCAAGAATGCACCTGTTACTACAAAGGTGGATATCTACAGCTTTGGTGTCATGTTGTTGGAAATAATATTTTGCAGGAGGCTCATTGAGTTACAAAGAATAGCAGGTGATGACTTGATACTCATTGATTGGGTTCTATATTTGGCAAAGGATGCTGTGACTCATGATGTTGAAGTTTCAAGTGATTTCGAGAGGTTTGAAAGAATGGCAATGGTGGGATTATGGTGCATAAGTCGTGACCCAACTCTTCGACCATCTATCAAAAAGGTGATACAGATGATGGAAGGAACTATACAACTTCTTGCCCTACTTTCATCTCTCAATGCCCAGAATTCTTCCTCTGCCATCAACTTAAACTCAACCATCACCGCTGGATCAAATTCTACTTGGAAGTCCTCCTCGGGTGATTTCGAATTTGGATTCTACCCTCTTTCCAATGCTCTCTTTCTTGTCGGAATATGGTTTGCGAAAATCCCAGACACAAACAGAACCCTCGTATGGTACCGGAGTCCTCCCGTCGAACCAAATTCCTTAATCCAACTCACTTCTGGAGGCCACCTAACCCTAACTCACCCTAATGGAACCATTGCTCAAACCATAGACGATGGAGGAGACACTGCTACTTCTGCCTACATGCAAGATAATGGCAATTTTGTTATGAAAGACTCCAACTTAAGAACTGTGTGGGAGAGCTTCAATTCTCCAGTTAACACACTCTTACCAGGCCAAACCTTGCAAACTACTCAAATCCTCTATTCTAAAGGGAGAGGAGCCTCCAACTACTCAACAGGGGATTTCATGTTGCAAATGCAGGGTGATGGGAACTTGGTTCTTAAAGCACACCAATGGTCAGATCCTGCATATTGGTACACTTCGACGTTAACCCCAGGTTTGAGTTTGGTGTTTAATGATACCAGCGCTTCCCTGTTTCTTGCCAATGGAACTGCCAACATTTACACTCTAACCAACAGCACTCCAACCCCAGTAAAGGATTACTATCACCGTGCCACAATAGATGAAAATGGCAATTTTCAGCAATATGCATATCACAAAAGAAACGGCACCAAGTGGCAGAGGGTTTGGAGAGCTATTGATGATCCTTGCAGAGTGGATGCCGTTTGTGGTATCTATGGCTTGTGCACTTCTCCTGATAATGAATCTGTGAACTGTGACTGTATTCCAGGTTATGTCCCATTGGATCAACAAGATGTGTCCAAAGGGTGTCACTCATCTGCTGTAATCAATTATTGTGCTGGATCTTCTATGACGAAGTTGAACTTCAAGCTGCAGGTGTTTGATGACACTGATTTCCAATTTTATCCTGATTTTGCTCGAATTGTTGGTGTTGATTTGGAAGGTTGTAAGAAGTCTGTGATGGATGATTGTAATATCATTGCTGCAACTTTTAATGCCACAACCTCAACATGCGCCAAGAAGAGAGTGTCATTGCTGAATGCCAGAAAGAGTTCATCTTCAATGGGACAGAAAGCAATTCTTAAAGTTCCTATCAGTGATGATTCTAGCACATCCAAAGTTTCCAACAAGAAGAGTTTTAATGTAAGAGTTTTCTTGAAGGTTATGGTTGCTGTTAGTGCCACTCTTGCCTGCCTCTTTGGAGCCCTTGCTGTCTACTATCACCCTTTTGCTCAGAGACTAATGAGAAGAAAGAAGTCTCTGAATGCAACAGCTATTGGAATCAACTTCAGAGAATTCACATTCCAGGAGCTGCATGAAGCAGCAGATGGATTCAGTAAGATTCTTGGTAAGGGATCTTCAGGCAAAGTCTACCGTGGTGCTTTAATAGTAAATGATGCAGAGATTGGTATAGCAGTAAAGAAGCTGGAAAAGAAGATTGAGAAAAGTGAAATTGAGTTCATGACTGAGCTCAAAATTATTGGCCGTACCCATCACAGGAACTTGGTGAGACTTTTGGGATTTTGCATTGAGAATAACCATCGACTTATTGTCTATGAGTTAATGCCAAACGGAGCCCTGTCTAGTTTGTTGTTTGGAAAGGGACAGGGAGAAAGACCTCCATGGGGTCAGAGGGTTGAAATGGCTCTCGGAATAGCAAGAGGCCTGCTATACTTGCATGAAGAGTGTGAAACCCAGATCATACATTGTGATATCAAGCCACAGAATGTATTACTGGATGCCAATCACACAGCAAAGATTGCTGATTTTGGACTTTCCAAGCTTTTGAACAAAGACCAAACTAGAACCACCACTAATTTTAGAGGGACAGTAGGGTATATAGCACCTGAATGGCTAAGGAGTGCACCAATAACGGCCAAAGTTGATATATTCAGCTTTGGGGTTATGTTACTAGAGATTATTTGCTGCAGGAGGCACATTGAGTCATGTCAGGATGAAGTCGGAAGTGAAGATAGTGATTTGGTTCTTCTAAATTGGATCTTAAGGTGTATGATGTCTAGGATACTCGAGCAAGAGATGAGGCATGACTCAGAAGTGCTCGATGATTTCAAGAGGTTTGAGCAAATGGCCTTGGTTGGATTATGGTGTGTTCATCCAAACCCAGCTCTGAGACCTTCAATGAAGCAAGTGATGCAAATGCTAGAGGGAACCGTGGAAGTTGGGGTTCCACCTTTGCTTTATGATCAGATGATGGCTGATCAGAGCTTATAG 4644 0.4208 MFLFLLCSSHVLGKANSIELGSSIVAGTNSSWKSPSGDYAFGFYRLVTGLYLVGIWFDKIPQNTLVWSANRDNPVEIGSTVNLTLSGQLVLQHVNGTSSPIYNGTDTTSVVMQDDGNFILINSVSNIIWQSFDSPTDTLLLGQTLDMNQMLCSNANGTVDYSTGKYKLEIQKPGGSILLTASQFQDNAYWNWWSGPTGQKNVRIIFDNTTAFLYAVNSTQIIYNMTTEARNPIKDYYYRVVIDDQGNLQKWIYHKENGVQWTSIWKAVAEPCKVTAICGVYSFCNSSDSSTFSCDCLPGYAPFDPSDPSKGCYPNVVRDLCAANSSASDFTMEVEPVQGVDIPNGEYTYADLQVKTNSDLESCKRELMNDCFSIAAVLVDNTACVKKRTPIINARPSILATDYREALTLIKVPRVHTHNDKDSPSWVVLLVALISCSLLAALFAVTATYHHPVYGYLIHKRAPPKPRTVDVDIHVKAFSYQHLREATNGFKEILGRGSFGTVYSGVLAFGGEQVEVAVKQLEQVELEEQGEKEFVTEVQVIALTHHRNLVRLLGFCNEQNHRLLVYEKMKNGTLFKFLFGEGVGKPSWECRARIVVEIAKGLLYLHEECDHQIIHCDIKPQNVLLDSNYSAKISDFGLAKLLMKDGTRSSTQSHARGTMGYMAPEWLKNAPVTTKVDIYSFGVMLLEIIFCRRLIELQRIAGDDLILIDWVLYLAKDAVTHDVEVSSDFERFERMAMVGLWCISRDPTLRPSIKKVIQMMEGTIQLLALLSSLNAQNSSSAINLNSTITAGSNSTWKSSSGDFEFGFYPLSNALFLVGIWFAKIPDTNRTLVWYRSPPVEPNSLIQLTSGGHLTLTHPNGTIAQTIDDGGDTATSAYMQDNGNFVMKDSNLRTVWESFNSPVNTLLPGQTLQTTQILYSKGRGASNYSTGDFMLQMQGDGNLVLKAHQWSDPAYWYTSTLTPGLSLVFNDTSASLFLANGTANIYTLTNSTPTPVKDYYHRATIDENGNFQQYAYHKRNGTKWQRVWRAIDDPCRVDAVCGIYGLCTSPDNESVNCDCIPGYVPLDQQDVSKGCHSSAVINYCAGSSMTKLNFKLQVFDDTDFQFYPDFARIVGVDLEGCKKSVMDDCNIIAATFNATTSTCAKKRVSLLNARKSSSSMGQKAILKVPISDDSSTSKVSNKKSFNVRVFLKVMVAVSATLACLFGALAVYYHPFAQRLMRRKKSLNATAIGINFREFTFQELHEAADGFSKILGKGSSGKVYRGALIVNDAEIGIAVKKLEKKIEKSEIEFMTELKIIGRTHHRNLVRLLGFCIENNHRLIVYELMPNGALSSLLFGKGQGERPPWGQRVEMALGIARGLLYLHEECETQIIHCDIKPQNVLLDANHTAKIADFGLSKLLNKDQTRTTTNFRGTVGYIAPEWLRSAPITAKVDIFSFGVMLLEIICCRRHIESCQDEVGSEDSDLVLLNWILRCMMSRILEQEMRHDSEVLDDFKRFEQMALVGLWCVHPNPALRPSMKQVMQMLEGTVEVGVPPLLYDQMMADQSL. 1548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00097 1547 SUPERFAMILY Protein kinase-like (PK-like) 1234 1533 IPR011009 -
Seca10g00097 1547 Gene3D Transferase(Phosphotransferase) domain 1 1326 1531 - -
Seca10g00097 1547 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1326 1533 - -
Seca10g00097 1547 SUPERFAMILY alpha-D-mannose-specific plant lectins 51 192 IPR036426 -
Seca10g00097 1547 ProSitePatterns Protein kinases ATP-binding region signature. 494 519 IPR017441 GO:0005524
Seca10g00097 1547 Pfam Protein kinase domain 491 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g00097 1547 Pfam Protein kinase domain 1251 1523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g00097 1547 Gene3D Transferase(Phosphotransferase) domain 1 569 776 - -
Seca10g00097 1547 SUPERFAMILY alpha-D-mannose-specific plant lectins 911 1019 IPR036426 -
Seca10g00097 1547 FunFam S-receptor-like serine/threonine-protein kinase 460 568 - -
Seca10g00097 1547 SMART blect_4 787 901 IPR001480 -
Seca10g00097 1547 SMART blect_4 23 135 IPR001480 -
Seca10g00097 1547 CDD B_lectin 34 135 IPR001480 -
Seca10g00097 1547 ProSitePatterns Protein kinases ATP-binding region signature. 1253 1279 IPR017441 GO:0005524
Seca10g00097 1547 Gene3D - 902 1039 - -
Seca10g00097 1547 Gene3D - 136 278 - -
Seca10g00097 1547 SUPERFAMILY Protein kinase-like (PK-like) 470 760 IPR011009 -
Seca10g00097 1547 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 569 767 - -
Seca10g00097 1547 Pfam S-locus glycoprotein domain 234 302 IPR000858 GO:0048544
Seca10g00097 1547 Pfam S-locus glycoprotein domain 996 1064 IPR000858 GO:0048544
Seca10g00097 1547 ProSiteProfiles Bulb-type lectin domain profile. 9 133 IPR001480 -
Seca10g00097 1547 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 13 133 - -
Seca10g00097 1547 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 787 1535 - -
Seca10g00097 1547 ProSiteProfiles Bulb-type lectin domain profile. 781 899 IPR001480 -
Seca10g00097 1547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1371 1383 IPR008271 GO:0004672|GO:0006468
Seca10g00097 1547 SMART serkin_6 1247 1525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g00097 1547 SMART serkin_6 488 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g00097 1547 FunFam S-receptor-like serine/threonine-protein kinase 1216 1325 - -
Seca10g00097 1547 ProSiteProfiles Protein kinase domain profile. 488 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g00097 1547 CDD STKc_IRAK 494 762 - -
Seca10g00097 1547 Gene3D - 10 134 IPR036426 -
Seca10g00097 1547 Gene3D - 777 900 IPR036426 -
Seca10g00097 1547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Seca10g00097 1547 Gene3D Phosphorylase Kinase; domain 1 465 567 - -
Seca10g00097 1547 Gene3D Phosphorylase Kinase; domain 1 1220 1325 - -
Seca10g00097 1547 Pfam D-mannose binding lectin 831 915 IPR001480 -
Seca10g00097 1547 Pfam D-mannose binding lectin 64 150 IPR001480 -
Seca10g00097 1547 FunFam Os04g0303100 protein 55 183 - -
Seca10g00097 1547 SUPERFAMILY alpha-D-mannose-specific plant lectins 828 960 IPR036426 -
Seca10g00097 1547 CDD STKc_IRAK 1253 1527 - -
Seca10g00097 1547 ProSiteProfiles Protein kinase domain profile. 1247 1537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g00097 1547 SMART egf_5 271 313 IPR000742 -
Seca10g00097 1547 SMART egf_5 1033 1075 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00097 Seca-Chr10 981845 990199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00097 474 765 Receptor kinase-like Gene Family AT5G45780 38.816 1.50e-54 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Seca10g00097 Pkinase 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00097 - - lang:109330973 1221.45