Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00088 ATGGGTTCGACATCCCCACCACCTGTAGCCACCACTGCTAATAACGGCAAAGAGATAACTCTGGAGCTTCCAACCTTTCTCCGTGTTTACAAGGATGGCACCATTGAACGCCTCCAAAACTCTCCATTTGTGCCACCTAGTACTTTTGAATCAGGGGTATCATCCAAAGACCTTGTCATCTCTGACAACCCCTCCATCTCTGCTCGTCTATACCTTCCACTTCCACAATCCAAACCCAATAAAGTCCCCATCTTGGTCTACTTCCATGGTGGTGGATTTTTCTTCGAATCTGCCTTCAGCCAACTCCACCATAAATATTGCAACTTGTTTGTCTCCCAAACACATGTTCTACTCATTTCCGTGGAGTACAGGCTCGCCCCAGAGGTTCCTCTCCCTGCAGCTTATGATGACTGCTGGAACGCTCTTAAATGGGTTGCTAGTACCAACACTGAGCCATGGCTGATCAACCATGGTGATTTCCAGAGAGTTTTCATTGGGGGTGACAGCGCTGGTGCTAATATTGTGCATAATATTGCGATGCGTGCTGGGGGTGAGGTTTTACCTCGTGGTGTTAAACTCTTTGGTGCTTTTGTTTCTCATCCCTACTTTTTTGGCTCAAAGCCAATTGGATCTGAAGAGGTTGCAGGGCATGAGCAGAGTGTGCCCTTTTTGACATGGGGTTTTGTTTATCCTTCTGCACCTGGTGGCCTTGACAACCCTCTCATCAATCCCTTGGCTCCTGGGGCACCTTCTTTGGCTGGCCTTGGATGTTCTAAGCTTCTTGTTTGTACAGCTGAAAGGGATATTTTGAGGGACAGAGCCATTTTGTACTATGAGGCTGTGAAGAAGAGTGGGTGGCAAGGTGAACTCCAACTGTTTGAAGTGGAAGACGAAGAACATGTTTTTCACATTCATGCTCCAGAATCCAAAAACGCTAACAAAATGATGAAACGCTTTGCTGATTTTCTCCTCCAGTACTAA 981 0.4669 MGSTSPPPVATTANNGKEITLELPTFLRVYKDGTIERLQNSPFVPPSTFESGVSSKDLVISDNPSISARLYLPLPQSKPNKVPILVYFHGGGFFFESAFSQLHHKYCNLFVSQTHVLLISVEYRLAPEVPLPAAYDDCWNALKWVASTNTEPWLINHGDFQRVFIGGDSAGANIVHNIAMRAGGEVLPRGVKLFGAFVSHPYFFGSKPIGSEEVAGHEQSVPFLTWGFVYPSAPGGLDNPLINPLAPGAPSLAGLGCSKLLVCTAERDILRDRAILYYEAVKKSGWQGELQLFEVEDEEHVFHIHAPESKNANKMMKRFADFLLQY. 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00088 326 Gene3D alpha/beta hydrolase 11 324 IPR029058 -
Seca10g00088 326 PANTHER ARYLACETAMIDE DEACETYLASE 24 319 - -
Seca10g00088 326 SUPERFAMILY alpha/beta-Hydrolases 26 325 IPR029058 -
Seca10g00088 326 Pfam alpha/beta hydrolase fold 85 303 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00088 Seca-Chr10 903902 904882 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00088 18 323 Carbohydrate Esterase AT3G48690 41.956 5.36e-79 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00088 - K13258 gmx:100813532 483.026