Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00087 ATGGCTCCTTCCACAACCAAAGAGATAGAAAAAGAGCTTCTTCCCCTTATCCGTGTCTACAAGGATGGCACCGTGGAACGTCTCTTAAGCTCTCCAACTGTGCCACCTTCCCCTCAAGACCCTGATATTGGTGTCTCATCCAAAGACATTGTTATCTCAGACAACCCCTTCCTCTCTGCTCGAATTTTCCTTCCGAAATCCCATCAAAACCAAAAACTTCCCATCTTCGTCTACTTTCATGGTGGCGCTTTTTGCGTTGAATCAGCCTTCTCCTTTTTCTGCCACCGCTACCTTAACCTCTTAGTTTCAGAAGCAAACATCATAGCTGTCTCAGTCGATTACAGACTCCTCCCAGACCACCCTCTTCCTGCAGCCTATGAAGATGGTTGGACTGCTCTTCAATGGGTTGCTTCCCATTCCACCAATAACCCCATTCACACAGAGCCATGGTTACTTGATCATGGTGATTTCAACAAGCTTTATGTAGGGGGTGACACCAATGGTGCTAACCTCGCTCATAACGTGACTATGCGTGCTGGCACTGAAACTTTACCTGGTAATCTTAAAATATTGGGTGCTTTACTCTGCTGCCCATTTTTCTGGGGCTCTAAGCCAATTGGGTCTGAACCTGTTGAGGAGCATGAGAATAGCTTGGCCATTAAAGTATGGAACTTTGTATACCCAAATGCATCAGGTGGGATTGATAACCCCATGGTGAACCCTTGTGCCCCTGGAGCACCTAGCTTGGCTACACTTGGCTGCTCCAAGATGCTTATTAGTATCACTGGCAAGGATGAGTTTAGAGACAGAAACATTTTGTACTATGAGACAGTGAAGAAGAGTGGGTGGCAAGGTGAACTTGAACTGTTTGAAGCAGGAGATGAGGAACATGGTTTCCAGCTCTTCAAGCCTGAAACTGATAAGGCTAAAAACATGATCAAACGCTTGGCTTCTTTTCTGGTATGA 966 0.4586 MAPSTTKEIEKELLPLIRVYKDGTVERLLSSPTVPPSPQDPDIGVSSKDIVISDNPFLSARIFLPKSHQNQKLPIFVYFHGGAFCVESAFSFFCHRYLNLLVSEANIIAVSVDYRLLPDHPLPAAYEDGWTALQWVASHSTNNPIHTEPWLLDHGDFNKLYVGGDTNGANLAHNVTMRAGTETLPGNLKILGALLCCPFFWGSKPIGSEPVEEHENSLAIKVWNFVYPNASGGIDNPMVNPCAPGAPSLATLGCSKMLISITGKDEFRDRNILYYETVKKSGWQGELELFEAGDEEHGFQLFKPETDKAKNMIKRLASFLV. 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00087 321 Pfam alpha/beta hydrolase fold 76 300 IPR013094 GO:0016787
Seca10g00087 321 PANTHER ARYLACETAMIDE DEACETYLASE 15 307 - -
Seca10g00087 321 FunFam Probable carboxylesterase 12 16 321 - -
Seca10g00087 321 Gene3D alpha/beta hydrolase 5 321 IPR029058 -
Seca10g00087 321 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 76 92 IPR002168 GO:0016787
Seca10g00087 321 SUPERFAMILY alpha/beta-Hydrolases 9 320 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00087 Seca-Chr10 879244 880209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00087 8 320 Carbohydrate Esterase AT3G48700 39.818 6.84e-79 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00087 - K13258 gmx:547489 516.153