Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00085 ATGTGTACCTTGCACTGTGGAGTGAATTCCTTTGTTACCTGTCCTGCACCAATGATGGACATTGTGACTGTTATTGTAACAACAACAACTAAGCCTTTTCCCACTAGATTTTTTCCTGAGATAATTGCTAGTATATTATCGGATTCCTTAAAAAGAGAGAGGGTTTTATCACTCTGTGATGCTTCAGATATTCTTAAAGATGCATTTTCTCAAACAGAATCATGCATGAATCACTATTACGAGGGATGTACGGCAACCGTGCTTCTGGTGTGGGCTGATGGTGATGAAAATTTCTTTGCACAATGTGCAAATGTTGGCGACTCTGCCTGTGTTATCAGTTTTGGCAGTGTTAATGGGAAACAAATCAAGATGACAGAAGATCACAAGATAACCAATCATTCTGAAAGACTCAGAATTGAAGGGACAGGAGAACCATTGAAAGATGGGGAAACACGTCTTTATGGTTTAAATCTTGCAAGGATGCTTGGGGACAAATTCCTGAAACAGCAGGATTCTCGGTTCAGCTCAGAACCTTACATAAGTGAAGTCGTGCATATTGATCAAGCAAGCAACGCTTTTGCTGTTCTAGCTAGTGATGGGTTATGGGATGTCATCAGCGTGAATAAGGCAATTCAGCTAGTGCTCCAGGTGAAGGAGAGATACTATACAGAGAGAGAGAATACAGCAGAAAAGATTGCTAGTATGTTGTTGAGTGAGGCTAAAACACTCAGAACAAAGGATAATACCTCTGTAATTTTCTTAGATTTTGATACCTTAAACAGTTTCTCTTGTAAAGTTGAATCCTAG 807 0.3965 MCTLHCGVNSFVTCPAPMMDIVTVIVTTTTKPFPTRFFPEIIASILSDSLKRERVLSLCDASDILKDAFSQTESCMNHYYEGCTATVLLVWADGDENFFAQCANVGDSACVISFGSVNGKQIKMTEDHKITNHSERLRIEGTGEPLKDGETRLYGLNLARMLGDKFLKQQDSRFSSEPYISEVVHIDQASNAFAVLASDGLWDVISVNKAIQLVLQVKERYYTERENTAEKIASMLLSEAKTLRTKDNTSVIFLDFDTLNSFSCKVES. 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00085 268 SUPERFAMILY PP2C-like 39 257 IPR036457 -
Seca10g00085 268 Gene3D - 34 262 IPR036457 -
Seca10g00085 268 SMART PP2C_4 2 254 IPR001932 -
Seca10g00085 268 PANTHER PROTEIN PHOSPHATASE 2C 56 253 IPR015655 GO:0004722|GO:0006470
Seca10g00085 268 ProSiteProfiles PPM-type phosphatase domain profile. 1 256 IPR001932 -
Seca10g00085 268 CDD PP2Cc 36 256 IPR001932 -
Seca10g00085 268 Pfam Protein phosphatase 2C 45 249 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00085 Seca-Chr10 857050 860562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00085 36 258 PP2C-type Phosphatase Gene Family AT5G19280 62.069 3.51e-96 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00085 K01090 - gmx:100170642 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g00085 10 857050 860562 Seca10g00085 10 857050 860562 ECH