Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00076 ATGACAAGTGCATTGACATATTATCTATTAGTGGCGTTGTTGTTTGGATTCATCCATCATCTGTGTGAGGGTCAACAACCTGAGGCTCTCCCTCCAGCAGCAGAGACCTGTAACGGAGTTTTCATTTCCTATGACTTCATTGGAAGAAGGAAGGAATTCCCTCGCCTCAAGAACGTCACTGCCCAATCTTGGGCCTTCAAAGCCACCGCAACGGTCCTCAACGCAGGCTCCGAGGTCGTCAAATCATGGAAGTTGTTCATCGGATTTCAACATAAAGAGATTCTAGTCTCTGCCACTGGAGCTGTTCTGATCGATGGAGGTGACCTCCCTGCTTCTGTTGAAAACGGGACTACCTTGGCTGGAGCTTCTCTCCCAGATTTAGAAAGCTCCATCGACACAGCCGGTGATCTTACCCAAATTCAAGCGCTCATTAAACTCATTGGCACCCAGTTTGGGGTTAAACCTCCTGGAATCCCTATGCCTAAAACAATTAAGTTGGTAAATGATGGATACAAGTGCCCCAAACCAAATTCACGTAAGAGTTCGATGTGGGCGTGTTGTAAAAAAGACCCGAAATTCAAGTCGAAACTTCCCAAGACAAAATTCTTGCCGCGGCAGAAAGGGGATCTTACCATATCCTATGACGTTCTTCAAGTGTATGACAATAACTATCTTGTTCAAGTGACGATGGAGAATCACAACCCTTTAGGACGCCTAGATCGTTGGAACTTGACGTGGGAGTGGATGAGAGGGGAATTCATATACAACATGAAAGGCGCATTCACGCGTGAGATAGAGTACGCAGGTTGCATCCATGGTGCCGCAGGAGAGTACTACAAGGAGATGGATTTCTCTAAAGTTCTCAACTGTCAAAAACATCCCATAATCAGTGACCTACCTCCAGAGAAATACAACGACACTGATATTGGAAAAATACCTTTCTGTTGCAGAAACGGCACTCTTTTACCTACACTCATGGATTCAACTCAATCCAAGTCAGTTTTCCAGATGCAGGTGTTTAAAGTTCCACCTGATATGAATAAATCAGCTATTTACCCTCCAGAGAAGTGGAAAATCATGGGAGTTCTTAACCCGGATTACAAATGTGGTGCACCTCTCAGAGTGGAACCTTCTAGATTTCCTGAACCTAGGGGACTTGATGCTTCGGTTATTATTTTTGCAAGTTGGCAAATAGTGTGCAATATCACTAGGCCAACCACAAGGAACACTCGTTGCTGTGTCTCTTTCTCTGCCTATTACAATGAGTCTGTAGTACCATGCAACACGTGTGCTTGTGGTTGTGAAAACACAAAGCATTGTAGTCCCAAAGCCAGAGCAATGCTTCTCCCTTCAGAAGCTCTTCTTGTACCTTTTGAAAACAGGACACGTAAGTCAGTTGCTTGGGCCAGATTAAAACATTTTCGTGTACCTAGTAAATTACCATGTGGTGATAATTGTGGAGTTAGCATAAACTGGCATGTGGCTTCAGACTTCAAAGGTGGGTGGAGTGCCAGAATCACTCTGTTCAATTGGGAGCCTGACCCTTTTCAGAATTGGTTCACTGCGCTGCAATTCAAGAAGGCTTCTCTTGGTTTTGAGAAAGTGTATTCCTTCAATGGGACATTACTTTCACGGCTCAACCACACTATTTTCATGCAAGGAGTACAAGGATCAAACTATTTGTTAGGTGAAGACAATGGAACAAACCCAAAGGTGCCTGGAAAACAGCAATCAGTTATTTCCTTTACAAAGAAAAACTCACCGGGTATCCAAATAGCAAACGGAGATGGCTTCCCTTCAAAGGTCCTTTTCAATGGAGAAGAGTGTTCCCTTCCGATTCAATTCCCCGTGCGAAGTGGAAACCAACATAATATAGGTTTAGTATATGAATTGTTAGTCTTAGTTTTAGCTTTTACAATGAATCAAATATTGTATTAG 1938 0.4345 MTSALTYYLLVALLFGFIHHLCEGQQPEALPPAAETCNGVFISYDFIGRRKEFPRLKNVTAQSWAFKATATVLNAGSEVVKSWKLFIGFQHKEILVSATGAVLIDGGDLPASVENGTTLAGASLPDLESSIDTAGDLTQIQALIKLIGTQFGVKPPGIPMPKTIKLVNDGYKCPKPNSRKSSMWACCKKDPKFKSKLPKTKFLPRQKGDLTISYDVLQVYDNNYLVQVTMENHNPLGRLDRWNLTWEWMRGEFIYNMKGAFTREIEYAGCIHGAAGEYYKEMDFSKVLNCQKHPIISDLPPEKYNDTDIGKIPFCCRNGTLLPTLMDSTQSKSVFQMQVFKVPPDMNKSAIYPPEKWKIMGVLNPDYKCGAPLRVEPSRFPEPRGLDASVIIFASWQIVCNITRPTTRNTRCCVSFSAYYNESVVPCNTCACGCENTKHCSPKARAMLLPSEALLVPFENRTRKSVAWARLKHFRVPSKLPCGDNCGVSINWHVASDFKGGWSARITLFNWEPDPFQNWFTALQFKKASLGFEKVYSFNGTLLSRLNHTIFMQGVQGSNYLLGEDNGTNPKVPGKQQSVISFTKKNSPGIQIANGDGFPSKVLFNGEECSLPIQFPVRSGNQHNIGLVYELLVLVLAFTMNQILY. 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00076 645 PANTHER COBRA-LIKE PROTEIN 7 20 639 - -
Seca10g00076 645 Pfam COBRA-like protein 224 403 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00076 Seca-Chr10 743771 746211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00076 31 637 COBRA Gene Family AT3G20580 58.049 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00076 - - gmx:100799716 1015.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g00076 10 743771 746211 Seca10g00076 10 743771 746211 ECH