Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00069 ATGCCTTCGCTGAAGCTTGTGTTGCTGTTTACAGCTGTTAGCTTCATAAGCTTTGGTAGTATCAAAGCACAGGACGCTCCTGTCTATCTTTACAAAAACTGCTCAACCAACAGCACTACCACCGCCAACAGTGCCTTCCAACTCCACCTCAAGACCCTCCTCTCTTCCCTCTCTTCCAACGCCACCGCCACCACCGAATTCTACAACACCACCGTCACCGGAAGATCCCCCTCCGACACGGTGTATGGACTTTTCATGTGCCGTGGTGACGTGGCACCTGCGCTGTGTCGACAATGTGTTGTGAACGCAACTCAACGACTTGTCTCAGAGTGCTCTTTGTCCAAACAGGCTGTGATATGGTACGACGAGTGCACGGTGCGCTACTCCAACCGCTCTTTCTTCTCCACGGTGGACACGAGGCCTCGCCTTGGCCTCCTCAACACCGCAAATATCTCCAATCAGGAAAGCTTCATGCGTTTGCTCTTCCAAACCATAAACAAAACTGCTGATGAGGCTGCCAATTCTTCTATTGGCTCCAAGAAATATGCCACTAACCAAGCAACCATTTCTGGGTTTCAGTCACTCTACTGTTTGGCACAGTGTACGCCTGATCTCTCACCCCAAGATTGCAGAAGGTGTCTCAGTGGCGTCATAGGAGACCTTCCATGGTGCTGTCAAGGAAAACAGGGTGGAAGGGTTCTTTATCCTAGCTGTAATGTTAGGTATGAGCTTTACCCTTTCTATCGCAACACTACTTCGCCATCGCCAACGCCAACGCCCTCACCGCCACTTCTTGTTCCTCCTACTGCTCCTGCCAATTCGGGAGGTGCAGGAAACAGTGGGATCTCAGCAGGTACTATTATTGCAATTGTTGTTCCAATAACAGTCGCTGTGCTTCTATTTATCGTCGGCGTTTGTTTCTTGACTAGAAGAGTTAGGAAGAAGCATGATTCTGTACCAGAGGGAAAGACTGCATATGACATCAGCACTGTGGAGTCCTTGCAATTCGATTTTGGCACAATTGAAGCCGCCACAGACAAATTCTCTGTAGATAACAAGCTGGGTGAAGGTGGATTTGGTGAGGTTTATAAGGGCACTCTTCCAAGCGGACAACAAATAGCTGTCAAGAGACTCTCCAAAAGTTCTGGGCAAGGTGGAGAAGAATTTAAGAATGAAGTGGTGGTGGTTGCCAAGCTTCAACACAGAAATTTGGTGAGGCTTCTGGGATTTTGCTTGCAAGGAGAAGAAAAGATACTTGTTTATGAATATGTGCCCAACAAAAGTCTTGACTATACACTTTTTGATCCTGAAAAGCAAAGGGAGTTGGATTGGGCAAGGCGTTACAGGATTATTGGAGGAATTGCAAGAGGCATTCAATATCTTCATGAAGATTCTAGGCTTAGAATTATACACCGTGATCTCAAACCTAGCAACATATTGTTGGATGGAGATATGAATCCAAAAATCTCAGATTTTGGTATGGCAAGAATATTTGGAGTTGATCAAACTCAAGGAAACACCAGCAGAATCGTAGGGACTTATGGTTACATGTCTCCAGAATATGCAATGCATGGAGAGTTCTCTGTTAAGTCTGATGTGTACAGTTTCGGAGTCCTCATTTTGGAGATTATAAGTGGCAAGAAGAATAGCTCTTTCTATCAAACAGACGGTGCTGAGGATCTAATGAGCTATGCTTGGACACTTTGGAAGGATGGAGCACCCTTGGAACTGATGGACCCCATATTAAGGGAATCCCATACCCCAAATGAAGTTATCAGAAGCATCCATATTGGTTTGCTCTGTGTCCAAGAAGATCCAGCAGACAGGCCAACAATGACAGAAATAGTTCTTATGCTAGACAGTAACACTGTTACTATACCAACTCCGAAGCAGCCTGCATTTTTCATCCATAGTGGAACTGATCCAAACATGCCAAAGGCGCAGTTTGATCAATCAATACCAGTGTCTATGAATGAGATGTCGATTAGTGAAATGGATCCTAGGGCAACCCTGTTTGGGTTGCTAAGCCTTGCATCACAAGCAGTTGCTACTCCTACTTACATCGGCTCTCACTGCAACAACAACACCACATACGCACCCAACAGCACACTGGCTGTCAATCTTAATGTTCTCCTCTATTCTCTCACCACCAACTCCTCCCAACAACAAGACGGTTACTATTTGACCATCATGGGCTTTGGAACAACCGATGCAGTCAACGGCATCTTTCTCTGCCGCGGCGACATCAACACCACCGTCTGTCAACAGTGTGTAACCACCGCTGCCAGAGAGATAACACGCCACTGCCCCAACCAAACGGAGGCCGTTATCTGGTACCAGGAGTGTTTGTTGCGTTACACAAACAAGTACTTCAAGTACTACAGCATCGAACCCAGATTGAACCCCATGGATGGCAACAACAACATCTCTGCCGTTGACTTTGAACGGTTCAACCAATCAGTGTTCACCTTGTTGAATGAATTGGCAACGGAAGCGGCGAATTCACTGTCGGCCAAGAAGTTCGCCACCGGGGAAATGGAAGTGACCAAGTCTCAGACGGTGTATGGATTGGCGCAGTGCAGCACCGATTTAACGAGTGGTCAGTGTGAGATATGTTTACGAAACGCCATCGGAACTCTTCCCGCGTGCTGCAGCGCCAAACAGGGCGCAGTACAATTCACTTTGGCTACAATTGAAGCTGCCACAAACAAGTTTTCACATGAGAACAAAATTGGCAGAGGAGGATTTGGTGTTGTCTACAAGGGTGTTCTCCCCGATGGACGACAAATAGCGGTAAAGAAACTTTCAAGAAGCTCCGGACAAGGTTCAATAGAATTTAAAAACGAAATTTTATTAATAGCTAAACTTCAACACAGAAATTTGGTGACCTTATTGGGATTCTGCTTGGAAGAACAAGAGAAAATGCTTATATACGAGTATGTGACAAACAAGAGTCTCGATCACTTTCTATTCGATCCTCAAAAGCAAAGGGTGCTGCATTGGTTTGAGCGTTATAAAATTATAGGAGAAATTGCACGAGGAATTCTTTACTTACATGACCATTCACGACTTAAAGTCATACATCGAGATCTCAAACCTAGCAATGTATTGTTAGATGACAATATGAATCCAAAAATATCTGATTTTGGTATGGCAAGAATAGTAGCAATTGATCAAGAACAAGGAAGCACTAATAGAATTGTCGGAACATATGGTTACATGTCTCCAGAATATGCAATGCATGGACAGTTTTCTGAGAAGTCAGATGTATTCAGTTTTGGAGTCATAGTTCTTGAGATAGTTAGTGCAAAGAGGAATGCTCGTCCAATTGAATCACAAGATTTTGAAGATCTCGCTTGGAGACATTGGAGAAATCAAACACCATTAGAAATACTGGACCCGAATCTAAAAGACTCATTTTCTCATAGTGAAGTTATTAAATGCATTCAAATTGGTTTATTATGCATCCAAGAAAATCCAGAGGATAGACCTACAATGGCGAAAATTGTTTCATACCTTAGTAGCCTTTTAGTTGAATTGCCACTTCCTCGACAACCTGCATTTTCCATGGATATAGGAATGAGACTTAACATGAAAACAACGGGGTCAAGTTTGGATCAATCTACTAATAATTCGATAGCATCCTCCATCAATGACATGTCTAAGAGTACTTTTTTCCCTCGATAA 3687 0.4413 MPSLKLVLLFTAVSFISFGSIKAQDAPVYLYKNCSTNSTTTANSAFQLHLKTLLSSLSSNATATTEFYNTTVTGRSPSDTVYGLFMCRGDVAPALCRQCVVNATQRLVSECSLSKQAVIWYDECTVRYSNRSFFSTVDTRPRLGLLNTANISNQESFMRLLFQTINKTADEAANSSIGSKKYATNQATISGFQSLYCLAQCTPDLSPQDCRRCLSGVIGDLPWCCQGKQGGRVLYPSCNVRYELYPFYRNTTSPSPTPTPSPPLLVPPTAPANSGGAGNSGISAGTIIAIVVPITVAVLLFIVGVCFLTRRVRKKHDSVPEGKTAYDISTVESLQFDFGTIEAATDKFSVDNKLGEGGFGEVYKGTLPSGQQIAVKRLSKSSGQGGEEFKNEVVVVAKLQHRNLVRLLGFCLQGEEKILVYEYVPNKSLDYTLFDPEKQRELDWARRYRIIGGIARGIQYLHEDSRLRIIHRDLKPSNILLDGDMNPKISDFGMARIFGVDQTQGNTSRIVGTYGYMSPEYAMHGEFSVKSDVYSFGVLILEIISGKKNSSFYQTDGAEDLMSYAWTLWKDGAPLELMDPILRESHTPNEVIRSIHIGLLCVQEDPADRPTMTEIVLMLDSNTVTIPTPKQPAFFIHSGTDPNMPKAQFDQSIPVSMNEMSISEMDPRATLFGLLSLASQAVATPTYIGSHCNNNTTYAPNSTLAVNLNVLLYSLTTNSSQQQDGYYLTIMGFGTTDAVNGIFLCRGDINTTVCQQCVTTAAREITRHCPNQTEAVIWYQECLLRYTNKYFKYYSIEPRLNPMDGNNNISAVDFERFNQSVFTLLNELATEAANSLSAKKFATGEMEVTKSQTVYGLAQCSTDLTSGQCEICLRNAIGTLPACCSAKQGAVQFTLATIEAATNKFSHENKIGRGGFGVVYKGVLPDGRQIAVKKLSRSSGQGSIEFKNEILLIAKLQHRNLVTLLGFCLEEQEKMLIYEYVTNKSLDHFLFDPQKQRVLHWFERYKIIGEIARGILYLHDHSRLKVIHRDLKPSNVLLDDNMNPKISDFGMARIVAIDQEQGSTNRIVGTYGYMSPEYAMHGQFSEKSDVFSFGVIVLEIVSAKRNARPIESQDFEDLAWRHWRNQTPLEILDPNLKDSFSHSEVIKCIQIGLLCIQENPEDRPTMAKIVSYLSSLLVELPLPRQPAFSMDIGMRLNMKTTGSSLDQSTNNSIASSINDMSKSTFFPR. 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00069 1228 SUPERFAMILY Protein kinase-like (PK-like) 333 640 IPR011009 -
Seca10g00069 1228 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 685 791 - -
Seca10g00069 1228 FunFam cysteine-rich receptor-like protein kinase 10 981 1180 - -
Seca10g00069 1228 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 27 132 - -
Seca10g00069 1228 Pfam Protein kinase domain 349 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g00069 1228 Pfam Protein kinase domain 906 1171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g00069 1228 Gene3D Transferase(Phosphotransferase) domain 1 981 1180 - -
Seca10g00069 1228 Gene3D Transferase(Phosphotransferase) domain 1 424 628 - -
Seca10g00069 1228 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Seca10g00069 1228 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1026 1038 IPR008271 GO:0004672|GO:0006468
Seca10g00069 1228 ProSiteProfiles Protein kinase domain profile. 905 1177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g00069 1228 SUPERFAMILY Protein kinase-like (PK-like) 891 1192 IPR011009 -
Seca10g00069 1228 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 23 667 - -
Seca10g00069 1228 MobiDBLite consensus disorder prediction 252 276 - -
Seca10g00069 1228 ProSiteProfiles Gnk2-homologous domain profile. 686 791 IPR002902 -
Seca10g00069 1228 SMART serkin_6 348 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g00069 1228 SMART serkin_6 905 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g00069 1228 ProSitePatterns Protein kinases ATP-binding region signature. 911 934 IPR017441 GO:0005524
Seca10g00069 1228 Gene3D Phosphorylase Kinase; domain 1 310 423 - -
Seca10g00069 1228 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Seca10g00069 1228 CDD STKc_IRAK 354 620 - -
Seca10g00069 1228 Gene3D Phosphorylase Kinase; domain 1 894 980 - -
Seca10g00069 1228 FunFam Cysteine-rich receptor-like protein kinase 10 880 980 - -
Seca10g00069 1228 ProSiteProfiles Gnk2-homologous domain profile. 139 247 IPR002902 -
Seca10g00069 1228 ProSiteProfiles Gnk2-homologous domain profile. 28 133 IPR002902 -
Seca10g00069 1228 FunFam Cysteine-rich receptor-like protein kinase 25 141 247 - -
Seca10g00069 1228 ProSiteProfiles Protein kinase domain profile. 348 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g00069 1228 FunFam cysteine-rich receptor-like protein kinase 10 424 626 - -
Seca10g00069 1228 FunFam Cysteine-rich receptor-like protein kinase 10 310 423 - -
Seca10g00069 1228 CDD STKc_IRAK 911 1176 - -
Seca10g00069 1228 MobiDBLite consensus disorder prediction 253 269 - -
Seca10g00069 1228 ProSiteProfiles Gnk2-homologous domain profile. 797 906 IPR002902 -
Seca10g00069 1228 Pfam Salt stress response/antifungal 692 788 IPR002902 -
Seca10g00069 1228 Pfam Salt stress response/antifungal 34 130 IPR002902 -
Seca10g00069 1228 Pfam Salt stress response/antifungal 150 245 IPR002902 -
Seca10g00069 1228 Pfam Salt stress response/antifungal 814 891 IPR002902 -
Seca10g00069 1228 Gene3D - 27 133 IPR038408 -
Seca10g00069 1228 Gene3D - 685 791 IPR038408 -
Seca10g00069 1228 Gene3D - 803 893 IPR038408 -
Seca10g00069 1228 Gene3D - 143 247 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00069 Seca-Chr10 653335 663917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00069 674 890 Receptor kinase-like Gene Family AT4G05200 38.117 6.45e-38 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca10g00069 Pkinase 3.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00069 - - gsj:114402115 1110.52