Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00062 ATGAGGGGAAACGGTAACGATGAGCGATGGACGGCAACAGGAACCGGAGGGATTCGGAAGAAAGGGAGCGGGGTTAGGGCGTGGCTCGTTCTCGACGGCACCGGAGAGACGCAGGTGGTGGAGGCCGGGAAGCACGCCATCATGAGGCGGACGGGGCTTCCCGCACGTGACCTGCGAATTCTTGATCCTCTCCTTTCATACCCTTCCACTGTTTTGGGGCGTGAGAGAGCCATCGTCATCAACTTGGAGCACATCAAAGCCATCATAACCGCTCACGAGGTTCTCCTCCTCAATTCCAGGGACCCCTCTGTCACTCCTTTCGTCGATGAACTCCGCGCTAGGATCCTTCGTCACCACCATGCCTCCACTCCTCATCATCTTTTTCTTAACCCTGACACCAAAAACCAAGATCTCCAGATTCCAGATGGCACCAAAATTCTCCCTTTCGAATTTGTAGCACTCGAGGCATGCCTTGAGGCTGCTTGCAGTGTCTTAGAAAACGAGGCAAAGACGTTGGAGCAGGAGGCTCATCCCGCCTTGGATAAACTCACTTCCAAGATTAGTACTCTCAATTTGGAACGCGTTCGTCAAATTAAGAGCCGTTTAGTTGCCATAACTGGTCGTGTTCAAAAGGTGAGGGATGAATTAGAACACTTGCTGGATGATGATGAAGATATGGCTGAGATGTATCTCACAGACAAGCTAGTTCAGCAGCAGTTGGAAAGTTCTTCTGCCTCCTCCCTAAATGATGAGGATGAGGATGGGGAAGACATGGATAATCTTCTTCAACAGGATATAGATGACAGGCACTTCAATCCTCCTCATATCTCTTACTTCATTTGA 843 0.503 MRGNGNDERWTATGTGGIRKKGSGVRAWLVLDGTGETQVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTVLGRERAIVINLEHIKAIITAHEVLLLNSRDPSVTPFVDELRARILRHHHASTPHHLFLNPDTKNQDLQIPDGTKILPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTDKLVQQQLESSSASSLNDEDEDGEDMDNLLQQDIDDRHFNPPHISYFI. 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00062 280 Gene3D Magnesium transport protein CorA, transmembrane region 102 269 - -
Seca10g00062 280 Coils Coil 155 175 - -
Seca10g00062 280 CDD Mrs2_Mfm1p-like 28 245 IPR039204 -
Seca10g00062 280 Gene3D - 17 99 - -
Seca10g00062 280 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 13 263 IPR039204 -
Seca10g00062 280 FunFam Magnesium transporter MRS2-1 16 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00062 Seca-Chr10 550772 551815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00062 28 277 MRS2 Gene Family AT3G19640 67.025 1.97e-113 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00062 - - gmx:100819578 348.206