Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00037 ATGAATTCCTTCCAATCGACCTCTTTCATGGCTGAACAAGAAACCTACAAACGGGCGGCGCCTCACCCTCCGGAGTTACTGAAAGCTAAGAAGCGAGTGGTTCTCGGCGATCTCACCAATTTTGGCATAACCAAGAAGAAGACGGAGATAATGTACAAGTGCAATCAATCATCCACTCCCTCTTCCATCTACAGCCATCTTCATGCCTTGGAGATGGAGGCGAATAGGAGGACATTGGCCAATTATGCGGAGACAGTTCAGAGCGAAGTTTCAAAAGAGATGCGGAAAATTCTGGTGGATTGGATGGTTGAGGTTGCAGAGGATTACAAGCTTATTTCTGATACCATTTATCTTGCTGTTTCTTGCATTGATCGCTTCCTATCTACCCGTCCTATCAGCAGGAACGACCTCCAGCTTCTTGGTGTTTCTTGCATGCTTATTGCCTCGAATTATGTAGAGATCACTCCTCCACCTGCCGAAGACTTCTGCTACATGACAGATAACACTTACACCCTCCCAGAGGTTATACAAATGGAGAGGGAGGTCCTCACATCCTTGAACTTTGGCTTGGGCTATCCCACCGCTAAAACTTTTCTCAGGCAAGAAACAATACCATTACCGCTTAATTGCTTTTCTAATTCTGTTACTATTACTTTAACTAACCTCACAATTCCTACTGCTACTGGATGCCAGAAATTTTATGGAAGATGCAAAGAAAGACTTCCAGCATTCCGAGCAGCAATTGTTGTTCTTGGCTTCTTATCTTCTGGAGCTAAGCCTATTAGACTATAA 792 0.4419 MNSFQSTSFMAEQETYKRAAPHPPELLKAKKRVVLGDLTNFGITKKKTEIMYKCNQSSTPSSIYSHLHALEMEANRRTLANYAETVQSEVSKEMRKILVDWMVEVAEDYKLISDTIYLAVSCIDRFLSTRPISRNDLQLLGVSCMLIASNYVEITPPPAEDFCYMTDNTYTLPEVIQMEREVLTSLNFGLGYPTAKTFLRQETIPLPLNCFSNSVTITLTNLTIPTATGCQKFYGRCKERLPAFRAAIVVLGFLSSGAKPIRL. 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00037 263 ProSitePatterns Cyclins signature. 95 126 IPR006671 -
Seca10g00037 263 PANTHER CYCLINS 58 203 IPR039361 -
Seca10g00037 263 SMART cyclin_7 100 184 IPR013763 -
Seca10g00037 263 Gene3D - 76 191 - -
Seca10g00037 263 SUPERFAMILY Cyclin-like 68 190 IPR036915 -
Seca10g00037 263 FunFam G2/mitotic-specific cyclin 78 191 - -
Seca10g00037 263 Gene3D - 63 201 - -
Seca10g00037 263 Pfam Cyclin, N-terminal domain 64 190 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00037 Seca-Chr10 340161 342240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00037 30 203 Core Cell Cycle Gene Families AT5G43080 47.236 1.63e-54 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00037 K06627 - mof:131155409 205.682