Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi9g00248 ATGGAATTGCAGGTGCCTTGGAATTGCATGCGTCTTCATCGTGCGATGATAAGCGAGCCACAGATGACTGTTGCAGATCCAATGGTTTCAGCCCCCTTGCGCGTGGAAGACGAGTCTGCAGCAACCTTTGGGAAAGCGATTGATGCGTTGCCACGCATCCCAGCTGAGGCAATAGGCTTTTTGACCAAAAAAAAAAACACAACCCCAGCTGAGACGCAGCTCGTTCTCCCTCTACCATCTCAAATGGTTACCTTCAGGTATCACCAGTACCAGGTTGTGGGGAGAGCTCTTCCTACTGAAAATGATGAACATCCTAAGATCTACAGGATGAAGCTTTGGGCCACCAATGAGGTCCGTGCCAAATCCAAGTTCTGGTACTTCTTGAGAAAGCTAAAGAAGGTTAAGAAAAGCAATGGGCAAGTGCTGGCCATCAACGAGATTTTTGAGAAAAATCCTACCAAGATTAAGAATTATGGAATTTGGCTCCGTTATCAGAGCCGAACTGGTTATCACAACATGTACAAGGAATACCGAGATACTACTCTAAATGGTGCTGTTGAACAAATGTACAATGAAATGGCATCTCGTCATAGAGTCAGGAGTCCATGCATCCAGATCATTAAGACTGCCACCATCCCAGCTAAACTCTGCAAAAGGGAGAGCACCAAGCAGTTCCATGACTCTAAAATTAAGTTCCCATTGGTGTTCAAGAAGGTTAGGCCCCCAACTAGGAAGCTCAAGACAACATACAAGGCATCCAGGCCCAACCTGTTTATGTAA 780 0.459 MELQVPWNCMRLHRAMISEPQMTVADPMVSAPLRVEDESAATFGKAIDALPRIPAEAIGFLTKKKNTTPAETQLVLPLPSQMVTFRYHQYQVVGRALPTENDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi9g00248 259 Hamap 50S ribosomal protein L18Ae [rpl18a]. 87 150 IPR028877 -
Sebi9g00248 259 Gene3D - 153 228 - -
Sebi9g00248 259 FunFam 60S ribosomal protein L18a 153 228 - -
Sebi9g00248 259 Gene3D - 79 152 - -
Sebi9g00248 259 PANTHER 60S RIBOSOMAL PROTEIN L18A 84 258 IPR028877 -
Sebi9g00248 259 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 88 209 IPR023573 GO:0003735|GO:0005840|GO:0006412
Sebi9g00248 259 SUPERFAMILY RplX-like 152 227 - -
Sebi9g00248 259 FunFam 60S ribosomal protein L18a 82 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi9g00248 Sebi-Chr9 3713354 3717227 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi9g00248 53 259 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 79.167 5.61e-122 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi9g00248 K02882 K22683 cit:102625748 363.229