Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi9g00225 ATGGATTTTTTCTCTGAATATGGTGATGCCAACCGGTACAAAATTCAAGAGGTCATTGGTAAAGGAAGTTATGGTGTTGTCTGTTCAGCCATTGACACTCATACCGGTGAAAAAGTGGCAATTAAGAAGATTCATGACATCTTTGAGCACATATCTGATGCTGCACGTATTCTCCGTGAGATAAAGCTGCTTAGACTCCTACGACATCCTGATATTGTTGAAATAAAACATATTATGCTGCCTCCTTCTAGAAAGGACTTCAAAGATATTTACGTTGTTTTTGAGCTCATGGAGTCTGACCTCCATCAAGTCATTAAAGCCAATGATGACTTAACAAAAGAGCACTATCAGTTTTTTCTTTATCAATTACTTCGAGCACTGAAGTATATTCACACTGCAAATGTATATCATCGAGATTTGAAGCCAAAGAATATACTGGCAAATGCGAACTGTAAACTTAAAATCTGTGATTTTGGATTAGCTAGAGTTGCCTTCAGTGACACACCAACAACTATATTTTGGACGGTAGGGACTGATGTTTACTGTTTGTTTAATGCATGTGTCTGTAGGATTATGTTGCTACAAGGTGGTATAGAGCTCCAGAGCTATGTGGATCATTTTACTCGAAGTCCATCAGTTGGATCTGATGACAGATCTGCTTGGGACTCCCTCACTGGATACTATATCACGGGCAAGGAGATACCAACTAGCATGAGGAAAAAACAGCCTGTTCCATTTGCACAAAAATTTCCAAATGCAGACCCTTTGGCACTACGACTGCTGGAAAGGTTGCTGGCTTTTGATCCAAAAGACCGGCCTACTGCTGAAGAGGCATTGGCTGATCCTTACTTCAAGGGATTGGCAAAAGTTGAAAGGGAACCATCCTGCCAGCCTATCACAAAAATGGAGTTTGAATTTGAAAGACGAAGAGTCACAAAGGAAGAAATTCGAGATGCTGTTGATCAATTCAGAAAGCAGTTTGCTCATCTAGAGGAAAATGGTAAAAATGGTCCTGTTATGCCTCTTGATAGAAAGCATGTTTCTCTTCCAAGGCCAACAATTGTACACTCAAATACAGTACACCAAAAAGAGCAAACCAATGTTGCTTCCAGCAAAAACCGGCCAACAGCTGATGAATATAATAAGAACACCAGAGATACAGAAAATCCAATGCCAAGATCTATGCAGGGACCACAAAGAATTCCATTAGCAAAACCTGGTAAAGTTGTTGGGCCTGTTGTTCCATACGAGTATGGTAGTGTTGTCAAGGATTCTTATGATCCAAGGACATTTATCAGAGGTTCTATGGTTCCTTCTCAAACTATACACCCAGCATATTATTATCAAAGGCCTAGCACTGGAAATCAAGAAAGGCTAGCAACGGAAACTGATAAGGGTGTGCCTTTGCAAGCAAAGCATGCACAGCAATGTGGAGTTAATGCCAAAATAGCACCAGATATAGCAATTAATATTGATACAAATCCCTTTTTTATGACAAGGGCAGGAGTGAACAAGTTAGAACAAGATGACCAAATTGCCATAGAAACAAACTTGTTGCAGTCAAAGGCTCAATATGGTGGAATTAGTGCTGCAGCTGGGGCCACTGCTCATAGAAAGAGTCCACGGTGGCCAACGGCCGTCACACCGGCGTCGAAGATCGCGGCGCTGGAGAGCGAGCGAGACGAATTAGCACGCGAGAACGCGGAGAAGAAGGAAGAGATCAAGAAGCTGAAGGCGGAGATCGAGCGGTTACGTAACGACGAGGCGGAAGCGGAGGAGCTGGAGGCGGATGCGGTGACGCTCCGGCAGGAAGCGATATCGGCGACGAGCGCCGCGGAGGAAGCGAGGACGGAGGCGGTAGAACTGCAGAAGGTTCTGGAAGAGAGAGAGTGTAGGATTGAAATTCTAGAGAGAGAAGGGAAGGGATTGAAGCAGTGGATTGCAGAGAGGGAGATGAAGATTAGGGATTTGGAGCGGAAGGTTGTGATTGTTGAAATGAGAGAGGCTGAGGAGAGGAGCAAAAGGGTTAGGATGGAGGAGGAGATGAGAGAGAAGATTGATGAGAAAGAGAGGGAAATTGAAGAGTTGAAAGGGGAGATTGAGGAGTTGGAGAAGGTGGTTATGGGGAAGAACTATGAGTTGGAGAAGAGGGGTGAGAGAGAAAATGGATTTGGAAGAGAGAGTTAG 2187 0.438 MDFFSEYGDANRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTVGTDVYCLFNACVCRIMLLQGGIELQSYVDHFTRSPSVGSDDRSAWDSLTGYYITGKEIPTSMRKKQPVPFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPITKMEFEFERRRVTKEEIRDAVDQFRKQFAHLEENGKNGPVMPLDRKHVSLPRPTIVHSNTVHQKEQTNVASSKNRPTADEYNKNTRDTENPMPRSMQGPQRIPLAKPGKVVGPVVPYEYGSVVKDSYDPRTFIRGSMVPSQTIHPAYYYQRPSTGNQERLATETDKGVPLQAKHAQQCGVNAKIAPDIAINIDTNPFFMTRAGVNKLEQDDQIAIETNLLQSKAQYGGISAAAGATAHRKSPRWPTAVTPASKIAALESERDELARENAEKKEEIKKLKAEIERLRNDEAEAEELEADAVTLRQEAISATSAAEEARTEAVELQKVLEERECRIEILEREGKGLKQWIAEREMKIRDLERKVVIVEMREAEERSKRVRMEEEMREKIDEKEREIEELKGEIEELEKVVMGKNYELEKRGERENGFGRES 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi9g00225 728 Gene3D Transferase(Phosphotransferase) domain 1 97 178 - -
Sebi9g00225 728 Gene3D Transferase(Phosphotransferase) domain 1 232 295 - -
Sebi9g00225 728 FunFam Mitogen-activated protein kinase 97 197 - -
Sebi9g00225 728 MobiDBLite consensus disorder prediction 359 406 - -
Sebi9g00225 728 FunFam Mitogen-activated protein kinase 3 106 - -
Sebi9g00225 728 ProSiteProfiles Protein kinase domain profile. 13 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi9g00225 728 SMART serkin_6 13 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi9g00225 728 SUPERFAMILY Protein kinase-like (PK-like) 9 288 IPR011009 -
Sebi9g00225 728 Gene3D Phosphorylase Kinase; domain 1 296 320 - -
Sebi9g00225 728 Gene3D Phosphorylase Kinase; domain 1 11 96 - -
Sebi9g00225 728 ProSitePatterns Protein kinases ATP-binding region signature. 19 43 IPR017441 GO:0005524
Sebi9g00225 728 MobiDBLite consensus disorder prediction 359 377 - -
Sebi9g00225 728 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 351 - -
Sebi9g00225 728 Coils Coil 313 333 - -
Sebi9g00225 728 Pfam Protein kinase domain 13 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi9g00225 728 ProSitePatterns MAP kinase signature. 48 151 IPR003527 GO:0004707|GO:0005524|GO:0006468
Sebi9g00225 728 Coils Coil 553 639 - -
Sebi9g00225 728 Coils Coil 675 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi9g00225 Sebi-Chr9 3460855 3467890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi9g00225 1 373 MAP Kinase Gene Family AT2G42880 66.589 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Sebi9g00225 Pkinase 2.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi9g00225 - - gmx:100811788 840.491