Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi9g00190 ATGGCAGATATTGTTATCTCCATTGTGGCTAAACTCACTGAATTTTTGGTGGAACGAGCAATGCGCAGGGCACAGCACTTTCTTTGTGTTGGTAAAGTAATCAAAGATCTTGAGAATGAAAAGAAGGAGCTCACATCTGAAAGAGATAGCTTGCTTGGTCGAGTTGAACAAGCCAAGGAAAGAACTGAAGTAATTGAGGAACCTGTAGAAAAGTGGCTTTATGATGTGAATACTTTACTGGAAGAGGTGGCAGATCTGGAGCAAAGGAATAGAACAAACACCAGTTGCTTTCAAGGAAAACATCGTTTATGCAAGCAAATGCTAAAGAAAATTGAGGCAATGAGGAATTTCAAAGGCAAAAGCAATGTTCAGCCATTTTGCCGTCGTGCTTCACTTCCAGCAAAATTGGCTTACAATCAACTTTTGGAGGCACTCCAAGAGGATGACATCTTCATGATAGGTGTGTATGGAATGGGTGGATGTGGGAAAACAACTCTTGTAATAGAAATTGTGTCTCAAACTCCAAACATTATAGACATTCAAAGCAAAATGGCAGATATGTTGAACCTGAAACTGGAGGAAGTATCTGAAGAGGGAAGAGCACAACGTTTATGGTTGAGTTTGAAAGAAAGGAAGCGAATTCTTATCATCATAGATGATTTATGGAGACAGTTTAATTTGGAGGATGTAGGCATTCGCTTAGATAATGATTACAATGGCAAGGTCCTTATAACGACTCGTGATCAACATGTGTGTGATTCAATGGACTGTCAAAAGAAGATTCATTTGGAGCTTTTATCTAGAGATGAATCTTGGACTCTGTTCCAAAAGCATGCAAACATTGATGATGGTTTCTCCAAGTCATTGGATGATGTGCCATTGAAAATTTGCTATGAATGTCGAGGACTGCCTATTGCAATTGTAGCTGTGGGATCATCCTTAAAAGGAAAATCTATTGCTAATTGGAATGTGGCATTGAACAGCTTGAGGCTTGCTGAGGCTATTGATGATCATGTGGAAGAAGGAGTGAAAGCTGCTTTGAGTTGTCTTAAATTAAGCTATGATTATTTACAAAACAAAGAGGCACAGTTGCTCTTCTTAATGTGTGCTATGTTTCCAGAAGACTATAGCATCTCAACAGAAGATTTGATCCGATATGCAGTTGGAGTGGGCCAAGGAGGAACATTTTCATTGGACTCAGCAAGGGACATGATTGAAGCAAATTTAAGCAAACTTTTAGGATCTTCATTGTTGATGCATGCTGAGGAAGGTAAAGACTATGTGAGAATGCATGACGTGGTTCGTGATGCAGCCTTATGGATATCAAAGAGATCAGAGAATCGCCAAATTTTGGTGAATCTTGACAAACCACTTAGCACCTTGGCAGAGGATGATAGTGTTAGAGGTTGTTTTGCAGTGTCCTCATGGTATAAGGAAAACCAAGTATTTCATCAGTTGCATGCTCCCCACCTTGAAATTCTATTGCTACATACTGATGTTAAGGTTTCCTTGAATTTATCACATGCAACATTTGAAGGAATAGAAGGGCTCAAGGTATTTTCTCTAATCAATTCATTCCTTCATAAACAATCACTTTTGTTACCTCAATCAACCCAGTTGTTGGCAAATCTTCGAACTCTGCGCTTGAACCGATGGCAGTTGGGTGACATTTCTTTCATAACAAGTTTAGCAAGACTTGAGGTTCTTGACTTGCGAGATTCTAGCTTCAATGAACTTCCTAGAGAAATAGAAAAGCTCAAAAGATTGAAGCTACTAGATTTGTCGCGTTGTGATATTCTTCAAGAAAATTATAATGAAGCAATAGGGAAATGTTCACAGCTTGAAGAATTATATATTTCAGGATGGCATCTAGCAAAATACATTTCTCAAAGTATTGTGGATATTAGTAGTCTCCCAAACCTGCAAAGGTTTGTAATATATGCTGGTCAGATCAATGCACCATATTATGTGAAAAGACTTCTAGAAGGTGTGGATTTCAATATCTCCAGCTTGAGAGCATGTAATAAGAATATCCTCCAAATAGCTGAGATTGTTCGTTTCGAAAGCCTTTATGGAGGATGTAAAAACATCATCCCAGACATGGTTGGAGTTGTGGGAGGTATGAATGGTTTAACTAATCTCATTCTTCATGATTGCCAAGAGATACAGAGCATCTTCAATACAACCTTTGATTCTGATCATGTTGTCTCAATTAAGGTTGATACTACAATTCCCAGGTTAGTCAAGTTAGAGTTGTTGCATTTGAATAACTTGAAAGAATTGTGTCAAGGTCCACCTCAGCAAGTGCTACCATTCTTTGAGAAATTAGAAACACTATGTATAAGGTATTGCCCGAAGTTGCACAACATATTTCCACAGGAATGTAGCTTAGGAAATCTTAATACCCTCATAATAGAAAATCATGATTGGGATGACAATTGCACGTCAGGTGAAGTACTATTCTCAACGTGTGTTGCTCAAAGTCTACAACAGCTAAAAAAGCTAGTTATAATATGTTGCAAGGAATTGAAGCATATAATTGAAAGTGGAGGCGAGCATTTTGTGATGCCCAATTTGAAGACACTTCACATTTCTAAATGTAGGAAGTTAGAGTCGATATTCCCAATATGTTGTTTTGAAGGACTACCACGACTAGAAAACTTAACAATAGAAGAGGCTCCTAAGCTGAAATATGTATTTGGTGAATGTGATCACCAAGATCATTCATCTCACCAAAACCAAATCATGCCTCCACATTTGAAAAATATCGAACTCCATCGTCTTGATAATCTAGTTGGGATATGTCCCAAAAATATCATGTAA 2823 0.3804 MADIVISIVAKLTEFLVERAMRRAQHFLCVGKVIKDLENEKKELTSERDSLLGRVEQAKERTEVIEEPVEKWLYDVNTLLEEVADLEQRNRTNTSCFQGKHRLCKQMLKKIEAMRNFKGKSNVQPFCRRASLPAKLAYNQLLEALQEDDIFMIGVYGMGGCGKTTLVIEIVSQTPNIIDIQSKMADMLNLKLEEVSEEGRAQRLWLSLKERKRILIIIDDLWRQFNLEDVGIRLDNDYNGKVLITTRDQHVCDSMDCQKKIHLELLSRDESWTLFQKHANIDDGFSKSLDDVPLKICYECRGLPIAIVAVGSSLKGKSIANWNVALNSLRLAEAIDDHVEEGVKAALSCLKLSYDYLQNKEAQLLFLMCAMFPEDYSISTEDLIRYAVGVGQGGTFSLDSARDMIEANLSKLLGSSLLMHAEEGKDYVRMHDVVRDAALWISKRSENRQILVNLDKPLSTLAEDDSVRGCFAVSSWYKENQVFHQLHAPHLEILLLHTDVKVSLNLSHATFEGIEGLKVFSLINSFLHKQSLLLPQSTQLLANLRTLRLNRWQLGDISFITSLARLEVLDLRDSSFNELPREIEKLKRLKLLDLSRCDILQENYNEAIGKCSQLEELYISGWHLAKYISQSIVDISSLPNLQRFVIYAGQINAPYYVKRLLEGVDFNISSLRACNKNILQIAEIVRFESLYGGCKNIIPDMVGVVGGMNGLTNLILHDCQEIQSIFNTTFDSDHVVSIKVDTTIPRLVKLELLHLNNLKELCQGPPQQVLPFFEKLETLCIRYCPKLHNIFPQECSLGNLNTLIIENHDWDDNCTSGEVLFSTCVAQSLQQLKKLVIICCKELKHIIESGGEHFVMPNLKTLHISKCRKLESIFPICCFEGLPRLENLTIEEAPKLKYVFGECDHQDHSSHQNQIMPPHLKNIELHRLDNLVGICPKNIM 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi9g00190 940 Coils Coil 69 89 - -
Sebi9g00190 940 Gene3D - 266 352 IPR042197 -
Sebi9g00190 940 Gene3D Ribonuclease Inhibitor 667 939 IPR032675 -
Sebi9g00190 940 Gene3D - 353 439 IPR036388 -
Sebi9g00190 940 Coils Coil 597 617 - -
Sebi9g00190 940 Gene3D Ribonuclease Inhibitor 487 654 IPR032675 -
Sebi9g00190 940 Gene3D - 176 264 IPR027417 -
Sebi9g00190 940 Pfam NB-ARC domain 171 355 IPR002182 GO:0043531
Sebi9g00190 940 Coils Coil 34 61 - -
Sebi9g00190 940 PRINTS Disease resistance protein signature 300 314 - -
Sebi9g00190 940 PRINTS Disease resistance protein signature 584 600 - -
Sebi9g00190 940 PRINTS Disease resistance protein signature 152 167 - -
Sebi9g00190 940 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 369 IPR027417 -
Sebi9g00190 940 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 29 900 - -
Sebi9g00190 940 Gene3D - 112 175 IPR027417 -
Sebi9g00190 940 SUPERFAMILY L domain-like 429 906 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi9g00190 Sebi-Chr9 2808942 2811859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi9g00190 138 560 WRKY Transcription Factor Family AT5G45050 25.328 1.14e-13 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi9g00190 - - aprc:113855292 1016.14