Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi9g00177 ATGAGTGTGGTGGGGTTTGACATTGGCAATGAAAACTGTGTCATTGCTGTGGCAAAGCAACGTGGGATTGATGTTTTGTTGAATGATGAGTCTAAACGGGAAACCCCTGCTGTGGTCTGCTTTGGCGAGAAGCAACGGTTTTTGGGGTCTGCTGGTGCTTCTTCTGCTATGATGCACCCCAAGACCACAATATCTCAAATAAAGAGATTGATAGGCAGGAAATTTGCAGACCCTGATGTGGAAAAAGAGCTGAAAATGCTCCCTGTTGAAACTTCTGAAGGCTCAGATGGTGGCATTTTGATTCACTTGAAATACTTGGAGGAGACTCATACATTTACCCCTGTTCAAATAATGTCCATGCTCTTTGCTCACTTGAAGACTATGACAGAAAAAGATTTGGAGACACCCATTTCAGATTGTGTTATTGGGGTCCCATCATACTTTACTGACTTGCAGAGACGGGCATATCTTGATGCAGCAAAAATTGCTGGGTTGAAGCCTTTGAGATTGATCCATGATTGTTCTGCAACTGCCCTTAGTTATGGAATTTACAAAACAAGTTTTCACAGTGAAGGTTCAATTTATGTTGCAATTATTGACGTTGGTCACTGTGATACTCAGGTCTCAATTGCTGCATTTGAGTTTGGGCAAATGAAGATACTTTCGCATGCTTTTGACAGATGCTTAGGGGGGAGGGACTTTGATGAGGTTCTATTTAGTCATTTTGCAGCCAAATTTAAGGAACAGTACAGCATTGATGTGTATTCTAATGCCAAGGCATGTATTAGGCTGCGTGCAGCATGTGAGAAATTGAAGAAAGTTTTAAGTGCAAATCTAGAGGCACCTCTAAATATTGAGTGTTTGATGGATGAGAAAGATGTTAAGGGATTTATCACAAGGGAAGAATTTGAAAAGCTGGCATCGGGATTATTGAAGAGAATTTCTATTCCTTGCAACAAAGCATTAATTGATGCAGGCTTGACTGCAGAGAAGATTTCTTCTATAGAGCTTGTTGGTTCAGGTTCTAGGATTCCAGCTATAAGTACAATATTAACTTCTCTATTCAAGAGAGAACCCAGCCGAAAGCTGAATGCAAGTGAGTGTGTAGCTCGTGGTTGTGCTCTACAATGTGCAATGCTCAGTCCTGTATACCGTGTGAGAGAATATGAGGTCCAGGATGTTATTCCTTTTTCATTTGGACTTTCATCGGATGAAGGTCCAATTTCTGCAGGATCAGATGGTGTACTTTTCCCAAAAGGCCAACCCATTCCAAGTGTTATAGTCCCAACATTTCATCGAACTAATCTGTTCCATTTGGAAGCCTTCTATGCTAATCCAAATGAACTACCACCTGGGACATCTCCTAAAATTAGTTGCTTCACGATTGGTCCTTTGCATGGATCCCATGGTAGTAAGACAAGAGTTAAAGTTAGAGTTCAACTAAATCTGCATGGCATTGTCACTATGGAAATAAACCTTCTTGTGGCTTCAGTTGATCAAGGATCAGTGGATGATTCAGTTATAGTGAGTGATCACCATTCAAGTTCTGATGCAATGGATATTGATCCCATGTCTGACACAGTTGCCAATGGCGCTGATGGTACAAGAAAAGATAAGGCTAACAGAAGGCTTAATGTGCCGGTGAATGAAAATATCTATTGTGGAATGACGAAGGCTGAGATTTTGGAAGCTCATGAAAAAGAACTTCAGTTGTCCCAACAGGACAGAACTGTGGAACTAACCAAAGAAAAGAAGAATACCTTGGAGTCTTATGTCTATGAGATGAGGAATAAGCTCTTCAACACATATCGAAGTTTTGTGAGTGAGCAAGAGAGGGATGACATATCTAGGAGCCTGCAAGAGACTGAGGATTGGCTTTATGAGGATGGTGATGATGAAACTGAACATGCTTATTCTTCAAAACTGGAAGATCTGAAAAGCTTGTGGATCCAATTGAGAATCGATATAAAGATGAAGAAGAAAGAGCACAAGCTATAA 1998 0.4074 MSVVGFDIGNENCVIAVAKQRGIDVLLNDESKRETPAVVCFGEKQRFLGSAGASSAMMHPKTTISQIKRLIGRKFADPDVEKELKMLPVETSEGSDGGILIHLKYLEETHTFTPVQIMSMLFAHLKTMTEKDLETPISDCVIGVPSYFTDLQRRAYLDAAKIAGLKPLRLIHDCSATALSYGIYKTSFHSEGSIYVAIIDVGHCDTQVSIAAFEFGQMKILSHAFDRCLGGRDFDEVLFSHFAAKFKEQYSIDVYSNAKACIRLRAACEKLKKVLSANLEAPLNIECLMDEKDVKGFITREEFEKLASGLLKRISIPCNKALIDAGLTAEKISSIELVGSGSRIPAISTILTSLFKREPSRKLNASECVARGCALQCAMLSPVYRVREYEVQDVIPFSFGLSSDEGPISAGSDGVLFPKGQPIPSVIVPTFHRTNLFHLEAFYANPNELPPGTSPKISCFTIGPLHGSHGSKTRVKVRVQLNLHGIVTMEINLLVASVDQGSVDDSVIVSDHHSSSDAMDIDPMSDTVANGADGTRKDKANRRLNVPVNENIYCGMTKAEILEAHEKELQLSQQDRTVELTKEKKNTLESYVYEMRNKLFNTYRSFVSEQERDDISRSLQETEDWLYEDGDDETEHAYSSKLEDLKSLWIQLRIDIKMKKKEHKL 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi9g00177 665 Pfam Hsp70 protein 3 650 IPR013126 GO:0005524|GO:0140662
Sebi9g00177 665 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 558 647 IPR029048 -
Sebi9g00177 665 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 385 514 IPR029047 -
Sebi9g00177 665 Gene3D - 186 360 - -
Sebi9g00177 665 MobiDBLite consensus disorder prediction 514 542 - -
Sebi9g00177 665 FunFam Heat shock 70 kDa protein 4 556 665 - -
Sebi9g00177 665 FunFam Heat shock 70 kDa protein 4 230 313 - -
Sebi9g00177 665 Gene3D - 38 113 - -
Sebi9g00177 665 FunFam Heat shock 70 kDa protein 4 1 80 - -
Sebi9g00177 665 Gene3D - 556 665 IPR029048 -
Sebi9g00177 665 SUPERFAMILY Actin-like ATPase domain 191 381 IPR043129 -
Sebi9g00177 665 PANTHER HSC70CB, ISOFORM G-RELATED 1 651 - -
Sebi9g00177 665 FunFam Heat shock 70 kDa protein 4 38 113 - -
Sebi9g00177 665 CDD HSPA4_like_NDB 2 381 - -
Sebi9g00177 665 PRINTS 70kDa heat shock protein signature 140 160 - -
Sebi9g00177 665 PRINTS 70kDa heat shock protein signature 363 383 - -
Sebi9g00177 665 PRINTS 70kDa heat shock protein signature 30 42 - -
Sebi9g00177 665 PRINTS 70kDa heat shock protein signature 332 348 - -
Sebi9g00177 665 PRINTS 70kDa heat shock protein signature 2 15 - -
Sebi9g00177 665 PRINTS 70kDa heat shock protein signature 472 488 - -
Sebi9g00177 665 PRINTS 70kDa heat shock protein signature 388 407 - -
Sebi9g00177 665 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 589 IPR029047 -
Sebi9g00177 665 Gene3D Actin; Chain A, domain 4 230 313 - -
Sebi9g00177 665 Gene3D - 5 374 - -
Sebi9g00177 665 FunFam Heat shock 70 kDa protein 4 103 192 - -
Sebi9g00177 665 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi9g00177 Sebi-Chr9 2637877 2642693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi9g00177 4 424 Calmodulin-binding Proteins AT1G16030 33.491 1.75e-76 255