Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi9g00168 ATGGGTAGTTGTCTAAGTAAAGGTAAAAAAAACTCAGAGCCAGAGCACAATGGTTATAGATATACTGGGTCTGTTGGTGTGCAAAACCAGAAGACCCATGAACCCTTGGTCAACCAATCAAGGTTACCTGCTAATCAACCTTACCAGTTACCTGAAAAACAAGCTGCATCCACTCAGACAGTGCCTCAGATACCATGGAAGCCTTCTGGTCCTGCCCCAAGTCCAAAACCTGTTAAGCAAGATTCAATCCTTGGGAATCAATTTGAGGATGTGAGACAGTTCTATACACTAGGGAAAGAATTGGGTAGAGGGCAATTTGGGGTAACACATCTATGCACTGAGAATTCAACTGGGATGCTGTATGCTTGCAAGTCAATTTCAAAGAAGAAACTTGTTAGGAAATCTGATAAGGAGGATATAAAGAGGGAGATTCAGATCATGCAGCATTTGAGTGGTCAACCCAACATTGTTGAATTCAAAGGTGCTTATGAGGATAGGCATTCGGTTCATGTTGTGATGGAGTTATGTGCAGGTGGTGAACTTTTTGATAGGATTATTGCAAAAGGGCATTACAGTGAAAGGGCTGCTGCTTCAATATGCAGACAAATTGTTAATGTTGTTCATATCTGCCATTTCATGGGTGTGATGCATAGGGATCTCAAGCCAGAGAATTTCTTGTTATCTAGTAAGGATGAAAATGCACTTCTCAAGGCAACGGATTTTGGCTTGTCAGTTTTTATTGAAGAAGGAAAGGTGTATCGGGATATAGTTGGCAGTGCTTATTATGTCGCTCCAGAAGTTCTACGGCGCAGATGTGGGAAGGAAATAGATATATGGAGTGCAGGAGTAATATTGTATATCTTACTTAGTGGTGTCCCTCCATTTTGGGCTGAGACTGAAAAGGGAATTTTTGATGCCATATTGGAAGGTCATATTGATTTTGAAAGCCAACCATGGCCTCAAATATCAGACAGTGCCAAAGACCTTGTTCGTAAGATGCTCATACAGGATCCAAAGAAACGCATTACTTCTGCTCAGGTTCTAGAGCACCCATGGATTAAAGATGGAAATGCTCCTGACAAGCCAATAGACAGTGCAGTCCTTTCCAGAATGAAGCAATTTAGAGCTATGAATAAACTAAAGAAACTTGCCCTGAAGGTCATTGCTGAGAATATGTCTGCAGAAGAGATCCAAGGGCTGAAGGCAATGTATATTACAAGAGATGAACTGGAAACAGCCATGAAAGAATATGGTATGGGTGATGAAGCCACAATCAAGGAAATCATATCTGAAGTTGATACAATTATATCTGAAGTGGATACAGATAATGATGGTAGAATCAACTTTGAAGAATTCTGTGCAATGATGAGGAGTGGAAACCAACCACAAGGCAAGCTATTTTAA 1404 0.4074 MGSCLSKGKKNSEPEHNGYRYTGSVGVQNQKTHEPLVNQSRLPANQPYQLPEKQAASTQTVPQIPWKPSGPAPSPKPVKQDSILGNQFEDVRQFYTLGKELGRGQFGVTHLCTENSTGMLYACKSISKKKLVRKSDKEDIKREIQIMQHLSGQPNIVEFKGAYEDRHSVHVVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVMHRDLKPENFLLSSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRCGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILEGHIDFESQPWPQISDSAKDLVRKMLIQDPKKRITSAQVLEHPWIKDGNAPDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENMSAEEIQGLKAMYITRDELETAMKEYGMGDEATIKEIISEVDTIISEVDTDNDGRINFEEFCAMMRSGNQPQGKLF 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi9g00168 467 Pfam Protein kinase domain 95 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi9g00168 467 MobiDBLite consensus disorder prediction 22 65 - -
Sebi9g00168 467 ProSiteProfiles EF-hand calcium-binding domain profile. 427 462 IPR002048 GO:0005509
Sebi9g00168 467 MobiDBLite consensus disorder prediction 1 81 - -
Sebi9g00168 467 ProSitePatterns Protein kinases ATP-binding region signature. 101 134 IPR017441 GO:0005524
Sebi9g00168 467 SMART serkin_6 95 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi9g00168 467 CDD EFh 404 457 IPR002048 GO:0005509
Sebi9g00168 467 SMART efh_1 431 459 IPR002048 GO:0005509
Sebi9g00168 467 CDD STKc_CAMK 94 352 - -
Sebi9g00168 467 Gene3D Transferase(Phosphotransferase) domain 1 181 371 - -
Sebi9g00168 467 PANTHER SERINE/THREONINE-PROTEIN KINASE 88 452 - -
Sebi9g00168 467 SUPERFAMILY EF-hand 404 457 IPR011992 -
Sebi9g00168 467 FunFam Calcium-dependent protein kinase 1 97 180 - -
Sebi9g00168 467 Gene3D - 404 465 - -
Sebi9g00168 467 Gene3D Phosphorylase Kinase; domain 1 97 180 - -
Sebi9g00168 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Sebi9g00168 467 Pfam EF-hand domain pair 403 457 IPR002048 GO:0005509
Sebi9g00168 467 SUPERFAMILY Protein kinase-like (PK-like) 94 374 IPR011009 -
Sebi9g00168 467 ProSitePatterns EF-hand calcium-binding domain. 440 452 IPR018247 -
Sebi9g00168 467 FunFam calcium-dependent protein kinase 1 181 359 - -
Sebi9g00168 467 Gene3D - 393 403 - -
Sebi9g00168 467 Gene3D - 372 392 - -
Sebi9g00168 467 ProSiteProfiles Protein kinase domain profile. 95 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi9g00168 Sebi-Chr9 2494533 2498992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi9g00168 404 467 EF-hand Containing Proteins AT3G20410 68.182 3.98e-20 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sebi9g00168 Pkinase 1.3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi9g00168 K13412 - gmx:100798651 744.577