Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi9g00164 ATGTTTTCCTCCTCCCTCACAAATGGGGTTTCCTCAAAACCTCACCTTTCCCATCACCCCCTTCCCTTCCCTCACCAACCTCACCACCAAACCCCTTTCCCTCACCCTCCATCGAGGAAATTCCACTCACCAATCCGCTGCGGCATCCGCGAGCTCCGCCAACGAATCGAAACGGTGAAGAACACTCAGAAGATCACCGAAGCAATGAAGCTGGTGGCCGCCGCCAGAGTCCGGCGAGCCCAAGAAGCCGTCATCAATGGAAGACCCTTCTCTGAGACCCTCGCTGAAGTGTTGCACGACATCAACGAACGCCTCCGAAACGACGACGTCGAGGTTCCTCTTACCAGCATCAGGCCAGTGAAGAAGGTTGCCCTTGTTGTCATCACAGGGGATCGTGGCCTCTGTGGCGGTTTCAACAATGCTGTGGGTAACTCTTTTTTCACTCGCAGGCCTTTTGTTGAGGTTGATAGGTTTATTGAAGGTGGTGGTTTTCCCACTACAAAGGAAGCTCAAGCTATTGCTGATGATGTTTTTTCACTTTTGTTAGTGAGGAAGTTGATAAGGTTGAGCTTGTGTATACTAGATGCCATGGAGGATGAGTATTTTAGGTTGACTTCTAAGGATGGGAAGTTGGCTGTGGAGAGGGATGTTATGAGGAGGAAGAAGAAGAAGAGAGATGATGGGTGTGTTCCCCTTATGCAATTTGAGCAAGATCCTGTTCAGATTCTTGATGCAATGATGCCTCTTTATTTAAACAGTCAGATTTTGAGGGGCTTGCAAGAATCACTGGCTAGTGAGCTTGCTGCTAGAATGGGTGCCATGGCTAATGCCACTGATAATGCAACTTAA 849 0.49 MFSSSLTNGVSSKPHLSHHPLPFPHQPHHQTPFPHPPSRKFHSPIRCGIRELRQRIETVKNTQKITEAMKLVAAARVRRAQEAVINGRPFSETLAEVLHDINERLRNDDVEVPLTSIRPVKKVALVVITGDRGLCGGFNNAVGNSFFTRRPFVEVDRFIEGGGFPTTKEAQAIADDVFSLLLVRKLIRLSLCILDAMEDEYFRLTSKDGKLAVERDVMRRKKKKRDDGCVPLMQFEQDPVQILDAMMPLYLNSQILRGLQESLASELAARMGAMANATDNAT 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi9g00164 282 Gene3D ATP synthase, gamma subunit, helix hairpin domain 214 282 - -
Sebi9g00164 282 PANTHER ATP SYNTHASE GAMMA CHAIN 28 142 IPR000131 GO:0015986|GO:0045261|GO:0046933
Sebi9g00164 282 MobiDBLite consensus disorder prediction 25 39 - -
Sebi9g00164 282 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 48 281 IPR035968 GO:0015986|GO:0045261|GO:0046933
Sebi9g00164 282 Coils Coil 49 69 - -
Sebi9g00164 282 Pfam ATP synthase 49 281 IPR000131 GO:0015986|GO:0045261|GO:0046933
Sebi9g00164 282 PRINTS ATP synthase gamma subunit signature 261 280 IPR000131 GO:0015986|GO:0045261|GO:0046933
Sebi9g00164 282 PRINTS ATP synthase gamma subunit signature 120 139 IPR000131 GO:0015986|GO:0045261|GO:0046933
Sebi9g00164 282 MobiDBLite consensus disorder prediction 1 41 - -
Sebi9g00164 282 FunFam ATP synthase gamma chain, chloroplastic 47 114 - -
Sebi9g00164 282 Gene3D ATP synthase, gamma subunit, helix hairpin domain 50 154 - -
Sebi9g00164 282 CDD F1-ATPase_gamma 49 281 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi9g00164 Sebi-Chr9 2458783 2459805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi9g00164 24 281 Primary Pumps ATPases AT1G15700 54.403 2.18e-105 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi9g00164 K02115 - qsa:O6P43_013711 316.62