Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi9g00138 ATGGAAGCCACCTGCAATGATGCCTCTAATGCTGCTGCAGTTGAACATTCTTCTCCAGTCATGTCGTTTAATGGGAAACGACTAATCATGGATGAGATGGATTTCTTTCCACACAATAATTCAACTCCAGTTAATGATCAAATCCACCTTCATGTAGATTTTGTAGCTTTGGTAGCTGAATTGCACCATATGAATGCTGAAAATCAACGTCTGAGAGAGCTGATTGATCGGGTGAACAATGACTACAATGCCCTTCACATGCAGCTTATGAAGCTGATGCAGAAAAACAGCATAAACATGAACAGGATGAGATTAATGAAGGAGCCACAGGGGAGAAGGGATAAGAGAGATGAGGGAAAACTGAGAGAAAAAAGCATGGTTGACTTGATGGAGTGCAAGACTGATCAAAAGATTTGCACCAGTAGAGATATTGGTCAGTTGGACCTGCCAGAGAAGCTGGATTCTGACTGCAAGGATGGTGCAAAATCCAGAAGGGACCATGAAGAGAGCCCAACTCACAAAGCATTTCCAGGGTCACTCTCTAATGAAGTCACCAGATTGAGTTCTTCTTTCAGGGATAATGTTGATCAAGCATCAGAAACTATGTCAATGATCAAGAAAGCCCGCGTATCAGTTAGAGCAAGATCAGAATCTTCCATGATTTCAGATGGATGTCAATGGCGAAAGTATGGACAGAAGATGGCCAAGGAAATCCATGTCCTCGAGCTTATTATCGTTGTACAATGGGGACTGGTTGTCCAGTTCGGAAACAAGTACAGAGGTGCTGAAGATAGAAGTGTGCTGGTGACAACATATGAAGGGCAACATAACCATCCACTCCCTCCTACTGCCAAAGCAATGGCATCAACCACATCTGCAGCTGCATCAATGCTTCTTTCAGGATCAATGCCAAGTGCAGATGGCCTAATAAATCCATCCATATTAGAAAGTGCAGCACTTCCTTGCTCACAGAACATGGCAACTCTCTCTGCTTCAGCTCCATTTCCAACTATCACATTGGATCTCACTCAAAATGCTACCAATTCCTCACAGCCACAAGGGGGACCACAAGGCCAACTCAGCCTCCTTCCCCCACTTCTGGCTCAGAAGTTTATGTCAACTCCAAATTTTTGGGCAGGGAATGGAGACAGCTTCATTTACAGACACAGTAAATGCAGCAACAGCTGCTATCACTGCAGATCCAAAATTCACAGCAGCTCTTGTGGCTGCCATAACATCTATCATTGGAAGTTCAAATCCAAATAA 1266 0.4384 MEATCNDASNAAAVEHSSPVMSFNGKRLIMDEMDFFPHNNSTPVNDQIHLHVDFVALVAELHHMNAENQRLRELIDRVNNDYNALHMQLMKLMQKNSINMNRMRLMKEPQGRRDKRDEGKLREKSMVDLMECKTDQKICTSRDIGQLDLPEKLDSDCKDGAKSRRDHEESPTHKAFPGSLSNEVTRLSSSFRDNVDQASETMSMIKKARVSVRARSESSMISDGCQWRKYGQKMAKEIHVLELIIVVQWGLVVQFGNKYRGAEDRSVLVTTYEGQHNHPLPPTAKAMASTTSAAASMLLSGSMPSADGLINPSILESAALPCSQNMATLSASAPFPTITLDLTQNATNSSQPQGGPQGQLSLLPPLLAQKFMSTPNFWAGNGDSFIYRHSKCSNSCYHCRSKIHSSSCGCHNIYHWKFKSK 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi9g00138 421 SMART WRKY_cls 221 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi9g00138 421 SUPERFAMILY WRKY DNA-binding domain 214 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi9g00138 421 ProSiteProfiles WRKY domain profile. 216 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi9g00138 421 MobiDBLite consensus disorder prediction 150 181 - -
Sebi9g00138 421 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 39 236 IPR044810 GO:0003700
Sebi9g00138 421 Coils Coil 61 95 - -
Sebi9g00138 421 MobiDBLite consensus disorder prediction 150 173 - -
Sebi9g00138 421 Gene3D WRKY domain 208 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi9g00138 Sebi-Chr9 2083354 2086053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi9g00138 53 343 WRKY Transcription Factor Family AT1G62300 44.218 1.38e-56 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi9g00138 - - gmx:100804246 288.115