Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi9g00132 ATGGGCAGGGGAGGAGGAGGCGCCACCAGCCGCCGCGGCGGTCGAGCTCAACGGACCCGGTTCGAGGCCGGTTTTTTTCAAAGAGCCGAGGTACCGTGGCGTGAGAAAGAGAGACCGTGGGGCCGGTTCGCCGCCGAGATCAGAGACCCTTTGAAGAAGGCCAGGGTGTGGCTTGGAACCTTTGACACCGCCGAGGATGCGGCGCGTGCATACGACGCCCGCCGCCAGAAACCTCCGCGGACCCAAAGCAAAGACCAATTTTCCTCTCTCGCAGCCTTTTTACCACCACGGCGACGCTGCCGTCGCCGATCCATTTTCCGATCATCGCGACTGCGATTCCTCGTCGTCGTGGTAGACGACGGTGACGGCGACAACGTGGCTTCGTCGCCGATGATGTCGTTTCGCCGCCAGCCGCTGCCGTTCGATCTCAACGCTCCACCGTTGGATGATGCTGACGTGGCTAACGGTGGCGGTGATGATCTGCACTGCACCGTTCTCTGCCTCTGA 507 0.6233 MGRGGGGATSRRGGRAQRTRFEAGFFQRAEVPWREKERPWGRFAAEIRDPLKKARVWLGTFDTAEDAARAYDARRQKPPRTQSKDQFSSLAAFLPPRRRCRRRSIFRSSRLRFLVVVVDDGDGDNVASSPMMSFRRQPLPFDLNAPPLDDADVANGGGDDLHCTVLCL 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi9g00132 168 Gene3D AP2/ERF domain 34 82 IPR036955 GO:0003700|GO:0006355
Sebi9g00132 168 PRINTS Ethylene responsive element binding protein signature 54 70 IPR001471 GO:0003700|GO:0006355
Sebi9g00132 168 PRINTS Ethylene responsive element binding protein signature 32 43 IPR001471 GO:0003700|GO:0006355
Sebi9g00132 168 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 37 74 - -
Sebi9g00132 168 ProSiteProfiles AP2/ERF domain profile. 27 88 IPR001471 GO:0003700|GO:0006355
Sebi9g00132 168 CDD AP2 37 73 IPR001471 GO:0003700|GO:0006355
Sebi9g00132 168 Pfam AP2 domain 38 77 IPR001471 GO:0003700|GO:0006355
Sebi9g00132 168 SUPERFAMILY DNA-binding domain 38 77 IPR016177 GO:0003677
Sebi9g00132 168 SMART rav1_2 37 84 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi9g00132 Sebi-Chr9 1975504 1976193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi9g00132 36 74 AP2-EREBP Transcription Factor Family AT1G28370 79.487 1.15e-16 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi9g00132 AP2 5.7e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi9g00132 K09286 - gmx:100795762 83.1889