Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi9g00120 ATGGTATGCTTAAGGGACCTCTCGTACCGTTTCTTTCACTTTGTGGTTTACACCAATTGTGGTCAAGATATTGATGGAGATTCATTTTGGGTAAGAAATTATGTGGATGCTGGTGTTGGCCAGCGGGAGTCGGGAGTGGTGGCTCAGTGGTTGGTAGTAAAAGAATTAGAGACAGGAATGCCTCAAGGAGTGGAGGAGAATGTTCAGAATCTCCTTTTCTCTTTGATTTCAAACTTTGGTTTTACTGATCATTTAAATCTTATACTTTGTGTCGCTGTGGATTGTGGTTGCCGCCTTGCCGGCAACTGGAAAGTCGAGAGAGGAGAGGGAGAAAGTGAGGATGAGGAAGCACTGCGAGAAGGGACCAAAGCCATTGGCTTCTCCTTGGTCAAAATAGGTTTTCTTCCCTCTATCACTGCTATGCTATTTATCAAATATGCAAATGGATGGGACGTCCTCCAATCTTTGTATTTTTGCTCTCTTAATAGGCCAATGGCATCTGCTTCAGACTCATGGATGAAGGAATATAATGAAGCAATGAAACTAGCCGATGATATTAGTGGCATGTTTTCTGAACGGAGTTCATTTCCTGCATCTGGACCAGAAACCCAGCGTCATGCATCTGCTATAAGAAGGAAGATCACAATATTGGGAACAAGGCTTGATAGTTTGCAGTCCCTTTTATCAAAGCTCCCTGTAAAGTCTGAGAAGGATATGAATCGTCGTAAGGACATGCTTGCAAATTTGAGGTCGAAAGTTAACCAAATGGCTTCAACATTGAACATGTCAAACTTTGCAAATAGGGATAGTTTGCTTGGGCCAGATATAAAGCCAGATGCAATGAGCAGAACTGTTGGCTTGGATAACAGTGGACTCGTTGGTCTTCAACGGCAAATTATGAAAGAGCAAGATGAGGGCCTTGAGAAATTGGAGGAGACTGTAATAAGTACAAAACATATTGCATTGGCAGTGAATGAAGAGCTGAATCTACACACTAGACTCATTGATGACTTGGACCAACATGTAGATGTTACAGATTCTCGGCTGAGGCGAGTGCAGAAGAACTTGGCAATTTTAAACAAACGTACCAAAGGTGGTTGCTCCTGCTTGTGCATGCTTTTATCAGTGGTTGGTATTGTGGTTTTGGTGGTTGTTATATGGCTATTGGTGAAATATTTGTAA 1182 0.4222 MVCLRDLSYRFFHFVVYTNCGQDIDGDSFWVRNYVDAGVGQRESGVVAQWLVVKELETGMPQGVEENVQNLLFSLISNFGFTDHLNLILCVAVDCGCRLAGNWKVERGEGESEDEEALREGTKAIGFSLVKIGFLPSITAMLFIKYANGWDVLQSLYFCSLNRPMASASDSWMKEYNEAMKLADDISGMFSERSSFPASGPETQRHASAIRRKITILGTRLDSLQSLLSKLPVKSEKDMNRRKDMLANLRSKVNQMASTLNMSNFANRDSLLGPDIKPDAMSRTVGLDNSGLVGLQRQIMKEQDEGLEKLEETVISTKHIALAVNEELNLHTRLIDDLDQHVDVTDSRLRRVQKNLAILNKRTKGGCSCLCMLLSVVGIVVLVVVIWLLVKYL 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi9g00120 393 SUPERFAMILY SNARE fusion complex 289 358 - -
Sebi9g00120 393 CDD SNARE_Qc 300 357 - -
Sebi9g00120 393 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 297 359 IPR000727 -
Sebi9g00120 393 Pfam SNARE domain 334 385 IPR000727 -
Sebi9g00120 393 SMART tSNARE_6 292 359 IPR000727 -
Sebi9g00120 393 Gene3D - 299 361 - -
Sebi9g00120 393 PANTHER SYNTAXIN 203 380 IPR045242 -
Sebi9g00120 393 FunFam syntaxin-51 isoform X2 299 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi9g00120 Sebi-Chr9 1815297 1819341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi9g00120 165 393 SNARE and Associated Proteins AT1G16240 72.845 2.19e-120 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi9g00120 K08503 - gmx:100794038 384.415