Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sebi9g00115 | ATGAATGATAAACAAGATGGAGAAAGAAATTTACCATTTATCATAATAACATATTACACGGCTAGGTCTGCCGCGGTAGGTTGCGGTAAGGTGTTAGTTGTTGATGATATTGAGGATCCTTCTGTAGAAAATCTAGTTTTGCGGCGTAAGCGTTGCTCTGAGAATTCTCCAAGTTCGATCATTGACCGTTTTGTTAGAAGTTGGGAAGCAGTTCCCCAGAGGAACTTGGAGGAATTAGGCACCCCTGAAGAGATTGGGGTCATTAAGAGAGCACTGTCCATTAGCCCAGGCCAAGAGGTGCCCGAAATAGAGGCTGCTAAATTTGTCGGGGTGGTTCATCTTTATTCTCATTTAGTGTTTTCGGAATCGGAGTCTGGTGTTGAGTTGTTAGGATTTGGAGAGAAAAGAAGGAACATGGCATCTTCAGATGATGAGGGCGATACTCAGCCACTATCTGTGTCAAATTACTATTTTGTTGATGACAAAGATGATATTGTATGTTTTTCTGTGTTGCCAATTCAATGGAGTGAGTCTGAGAGTTTGGATGGGAAGAAAGAGGTGTTCGTGAATGGTTCATCGGATAATGGGCTGCAGAAAATTTTCAAGCAAGTAACAGCGTGGAGGTTTGATCTTTCCAATGTGAAGCCTGAGATATCAGTGCTATCAAAGGATGTGGGATGGATCAAACTTCAGAAGCCAAGGAAGAGCTATGAAGATACCATAAGGACTATTTTAATCACCATTCATTTCCTGAATCATGTGAAGAAGAATCCTGACATTTCTGCCAAATCTATGTGGGATAACTTGAGTAAGAATAAGGAGTTTAGCTCTTATGAGGTTATCCCCTCGCAAAAGGACTTATTAAACCATATGGCTTTAATGGGGGAAGCTTCCAAAAGGGATGCTGCCTTAGCTAAGTCCAAGCTTTTGCTCATGGTTTTGGAAGATAAGGATAAGCTGAGGATTAAGAAGCTTTCTGATGAGGAAGCTAAAGATTTAGAACGACCTGGATTTATAATTGATGATATTGACAATGACAATGACATGATTGAGGAAACTGCAGAAGAGTCAGATGAAGAGGATGAGTTGTTTGATTCTGTTTGTGCAATTTGTGACAACGGTGGTGAACTTTTGTGTTGTGATGGAAAGTGTATGAGGTCCTTTCATGCTAATAAGGATGATGGTGAAGAATCTTGTGTCTCTCTCGGTTTTAGCAAGAAGAAAGTTGATGAGATCCAAAACTTCTACTGTAAGAATTGTGAATATAATCAGCACCAGTGCTTTGCATGCGGCAAGCTAGGCTGTTCTGATAAATTTTCGGGTGCTGAGGTCTTCAAATGCGCTTCTGCAACCTGTGGCTTCTTTTATCATCCACTTTGTGTTGCAAAGTTACTTCACCGGGTGATTGAGGATGCTCCAACAGAACTTGAGAAAAATATAGCTAAGGGGGAGCCTTTTACTTGCCCTACACATTATTGCTGTGTCTGCAAGGAAATGGAAGACAAGAATGAACATGAATTACAATTTGCTGTTTGTAGGCGTTGTCCCAAGTCATACCATCGTAAATGTCTGCCAAGAAAGATTGCTTTTAAAGACAAAGTGGATGAAGGTATTATAAAAAGGGCTTGGGAAGGACTTTTACCAAACAACCGCATTCTGATCTATTGCTTAAAGCATGAGATCGATGAAGAACTTGGGACTCCTATAAGAGATCATATAAAATTCTCCAATGGTAAAGCTACTGTTCGAGAAATTAAGACTGAAGAGAAGACAAAGCCTCCAACCAAAGAGAGAGTTATATTGAACAAGAACAATGTAGAATCAGATAATTTACTTACCAAAAAAACTAGTACTAAGGTATCTAAAATGTCTGAGAAAATGTCTTCTGGGAAAGTCATCAAGAAATCTGAAAAGATTTCTGGATCAAATGTATCAAGGAAGAAAGCTAATGAAGCATCAAGGTGTTTGAATGAAAATAAGAGATCGATCTCAAAGGAAACTGAAAGGTCTGACCATGAGGAAAACCAACCCTCCCTGGGTGAGCAACTATATGCTTTCTGGCAGAAGGGTTCTGAAAAAATTAGTTCTGGCAATCAGGTTGATAATGTAGCTAATAACACCCTGTCTGTTAAACCTACTAAAAAGCTGAGTAGTGCATTGCTCCCATTAGATGCAGATTCAGAAAGGAGATTGTTGGCTTTGTTTAAAGAATCTATGTCATCAATTACTTTGGAGGATGTGATAAAGGAACATAAATTTGCTTCTACCCACACTCATTCATTGAAAAATGTTGTGGAGAAGACCATTACAGTGGGGAAGTTGGAAGGCTCAGTTGAGGCTGTTCGAACAGCTCTAAAGAAGCTGGAGGCTGGGCACAACATTCGGGATGCAGAAGCTGTTTGTGGCCCTGATGTTCTAAACCAGATATTTAAGTGGAAGGACAAGTTGAAAGTATATCTTGCACCTGTTCTAATTGGTAATCGCTACACATCATATGGTCGCCATTTCACACAAGTGGAAAAACTTGAAGGGATTGTTGATAAACTCCATTGGTATGTTCAGAATGGTGATACAATTGTGGACTTCTGTTGTGGTGCTAATGATTTTAGCATTCTTATGAAGAAAAAGCTTGATGAGACTGGGAAGAGATGCTCATACAAAAACTATGATTTACTTCCAACAAAGAATGATTTTAATTTTGAGATGAGAGATTGGATGACTGTCCAGAGAAAGGAGTTGCCTGCAGGGTCGCAATTGATTATGGGCCTTAATCCCCCCTTTGGGCTTAAAGCAGCTTTGGCCAACAAGTTTATAGACAAAGCTCTTGAGTTTGAACCGAAGCTCCTGATTCTTATAGTACCACCAGAGACAGAGAGGCTAGATAAAAAACGGTTGCCGTATGATCTTGTCTGGGAGGATGATAAGTTTCTAGCAGGCAAGTCATTTTATCTACCTGGATCAGTTGATACTTACGACAAGCAAATGGTACAATGGAATAAAAAGCCACCCCCAGTTTACCTTTGGAGCCGTCAGGACTGGACTGATAAACATATGGTCATAGCTCGGGAGCATGGTCACCTTATCAGCCAGCATACAGTATCAAAAATGGAAAGCTTTGATAATGAAAAAGCAACTGCCAGTCATACTATGGATGATAACTATGGTGATGATCTCGTGAAGTCAACTGATGATGAAGATCAAACATCTATGCATGAAGGACAGAAAGGAAGCTTGATTCATGAAAATGTTGATCGAGAGAGTCAAGAGAGAGAGGAATATTGGGTCAGCAAGGCTGAGAAGACCTCATGGAAGAGGAAACGAACTGAGGAAAATGATCGAAGAGGACCAGCTGTGACCTCACCAGCCAAAAGGCAAGCTATAAATCAAATGCCTGAGAGAGTACTGGGCCGTGGTATATCCAATCCAGTTGATGGGAGATCCTCAGTTGAAGGTTTTCAGCCCAAATCTGATATGATACCTCCATATTTTGAAGTTAGTGATAATGGTTGTAGGCAGCATCTGGAGCCCAGCTTGGAGTTAGGGGTAGCATATGATGGGACCCAAAAATGGCCAAGTGTTCCCAATCCCCTTTCTGACTATGGGGTTACAGATAAAGATGAACACCATAGCAGCCTTCTGGGAGACAGCTCCAATAGCATTGGACGTAGACCCTACATCAGGGAGGATGATATGTACCTGAGGGAACTAGAGACAAGGCAACAGGTTCCCCTTTATGGCCTTCAGAATCCTGATTATATGAGAAGTAATTATCTATCTGGTCATGATCCTGCTTATAGCCATATGGGATCTAGTTATTCAGTACTTGGTTCAGTATCTGAGCCGTCTTACATGATGAATTCACCGGCTATGCAACGATATGCACCTCGCCTTGATGAATTAAACCATGTCAGGATGGACTCTTTGGGGTCTGAACCTCCTATAATTGGTAGAAATGGCATTTCTGAACGTAATGTGCCCCAACCTGGATATAGAAATGGGCTTCTGGGGTTTGCAGCTGGTCCTCACCATTTGTATTCACGCCAGAATTCAGCAGGTCGGTTTCAATGA | 4068 | 0.4108 | MNDKQDGERNLPFIIITYYTARSAAVGCGKVLVVDDIEDPSVENLVLRRKRCSENSPSSIIDRFVRSWEAVPQRNLEELGTPEEIGVIKRALSISPGQEVPEIEAAKFVGVVHLYSHLVFSESESGVELLGFGEKRRNMASSDDEGDTQPLSVSNYYFVDDKDDIVCFSVLPIQWSESESLDGKKEVFVNGSSDNGLQKIFKQVTAWRFDLSNVKPEISVLSKDVGWIKLQKPRKSYEDTIRTILITIHFLNHVKKNPDISAKSMWDNLSKNKEFSSYEVIPSQKDLLNHMALMGEASKRDAALAKSKLLLMVLEDKDKLRIKKLSDEEAKDLERPGFIIDDIDNDNDMIEETAEESDEEDELFDSVCAICDNGGELLCCDGKCMRSFHANKDDGEESCVSLGFSKKKVDEIQNFYCKNCEYNQHQCFACGKLGCSDKFSGAEVFKCASATCGFFYHPLCVAKLLHRVIEDAPTELEKNIAKGEPFTCPTHYCCVCKEMEDKNEHELQFAVCRRCPKSYHRKCLPRKIAFKDKVDEGIIKRAWEGLLPNNRILIYCLKHEIDEELGTPIRDHIKFSNGKATVREIKTEEKTKPPTKERVILNKNNVESDNLLTKKTSTKVSKMSEKMSSGKVIKKSEKISGSNVSRKKANEASRCLNENKRSISKETERSDHEENQPSLGEQLYAFWQKGSEKISSGNQVDNVANNTLSVKPTKKLSSALLPLDADSERRLLALFKESMSSITLEDVIKEHKFASTHTHSLKNVVEKTITVGKLEGSVEAVRTALKKLEAGHNIRDAEAVCGPDVLNQIFKWKDKLKVYLAPVLIGNRYTSYGRHFTQVEKLEGIVDKLHWYVQNGDTIVDFCCGANDFSILMKKKLDETGKRCSYKNYDLLPTKNDFNFEMRDWMTVQRKELPAGSQLIMGLNPPFGLKAALANKFIDKALEFEPKLLILIVPPETERLDKKRLPYDLVWEDDKFLAGKSFYLPGSVDTYDKQMVQWNKKPPPVYLWSRQDWTDKHMVIAREHGHLISQHTVSKMESFDNEKATASHTMDDNYGDDLVKSTDDEDQTSMHEGQKGSLIHENVDRESQEREEYWVSKAEKTSWKRKRTEENDRRGPAVTSPAKRQAINQMPERVLGRGISNPVDGRSSVEGFQPKSDMIPPYFEVSDNGCRQHLEPSLELGVAYDGTQKWPSVPNPLSDYGVTDKDEHHSSLLGDSSNSIGRRPYIREDDMYLRELETRQQVPLYGLQNPDYMRSNYLSGHDPAYSHMGSSYSVLGSVSEPSYMMNSPAMQRYAPRLDELNHVRMDSLGSEPPIIGRNGISERNVPQPGYRNGLLGFAAGPHHLYSRQNSAGRFQ | 1355 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sebi9g00115 | 1355 | Pfam | Cytosine specific DNA methyltransferase replication foci domain | 152 | 271 | IPR022702 | - | |
| Sebi9g00115 | 1355 | SMART | PHD_3 | 367 | 421 | IPR001965 | - | |
| Sebi9g00115 | 1355 | SMART | PHD_3 | 426 | 492 | IPR001965 | - | |
| Sebi9g00115 | 1355 | SMART | PHD_3 | 493 | 560 | IPR001965 | - | |
| Sebi9g00115 | 1355 | CDD | PHD3_NSD | 492 | 559 | - | - | |
| Sebi9g00115 | 1355 | MobiDBLite | consensus disorder prediction | 1136 | 1155 | - | - | |
| Sebi9g00115 | 1355 | CDD | PHD2_NSD | 426 | 491 | - | - | |
| Sebi9g00115 | 1355 | MobiDBLite | consensus disorder prediction | 616 | 678 | - | - | |
| Sebi9g00115 | 1355 | MobiDBLite | consensus disorder prediction | 1040 | 1117 | - | - | |
| Sebi9g00115 | 1355 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 424 | 514 | IPR013083 | - |
Showing 1 to 10 of 17 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sebi9g00115 | - | - | gmx:100803073 | 1779.99 |
Showing 1 to 1 of 1 entries