Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi9g00113 ATGGTGCTACTGCTACTGAATTTGGCTCACGACCATGCACAGGTGGTGCCTATTTCACTCTTTGTGGCTGTTCTCTGCCTCTGCTTGCTCATTGGTCACTTGCTCGAAGAAAACCGTTGGGTTAATGAATCCATTGTTGCCATTCTAATTGGATGCATTGCTGGAATGATACTCTTATTTATCACTAAGGGGAAAAGTTCTCACATCCTTACTTTTAATGAAGAACTATTCTTCATATATCTCCTTCCTCCCATAATATTCAATGCAGGATTTCAGGTAAAGAAGAAACAGTTCTTCCATAACTTCTTAACCATCATGCTATTTGGGGTGATTGGTGTTTTTATTTCATCATTTGTTATTACAGGAGGCAGCTGGTGGCTGTTCCCCAAGTTGAACTTCCTTGGCCTAACTGGGCGAGATTATCTTGCTATAGGAACAATTTTCTCATCAACGGACACAGTTTGTACACTACAGGTTCTCCATCAAGATGAAACTCCTTTACTATACAGCCTAGTCTTTGGGGAAGGAGTGGTAAATGATGCAACATCAGTTGTTCTCTTCAATGCAGTGCAGAAGGTTGATGTTTCAAGACTTGATGCCAGGACATTGCGTGGCATTGGAGATTTCTTGTATCTATTTTCAACAAGCACTGGTCTTGGAGTTATAGCTGGACTTCTCACAGCATATATCTTAAAAGCCTTAAGCTTTGGAAGACATTCAAGTGTTCGTGAAATTGCATTGATGGTGTTAATGGCATACCTATCCTACATGTTGTCTGAGCTATTCGAACTAAGTGGAATCCTCACTGTTTTCTTTTGTGGAATATTTATGTCACACTATGCATGGCATAATGTGACCGAAATTTCAAGAATCACAACCAGGCATGTGTTTGCTTCATTGTCATTTATTGCAGAAACCTTCATATTTCTTTATGTGGGCATGGATGCCCTTGACATGGAAAAGTGGAAGATGAACCAATTAAGTTTTGGAAATTTGATTGGAATTTACAGCTGCTTAATCTTATTAATATTGCTTGGGCGGGCTGCATTTGTTTTCCCCCTCTCTGCTTTATCCAATTATATGAATAGGCGAGCTGACCAAGCATCAAGTATCACATTCAAACAGCAGATAATTATTTGGTGGGCTGGGCTAATGAGGGGAGCAGTCTCCATTGCTCTAGCTTTCAAACAGTTCACATTTTCTGGGGTTACTTCTGATCCAGTTAATGCAACAATGATTACCAACACCATTATTGTTGTCCTTTTCAGCACGCTGGTGTTTGGTTGTTTTACAAAACCACTTATTAGATATCTGCTTCCCCACAATGCAACAAGTATAAATGTCAGCCATGAAGAATCAGGTCCACCTGCTGAGGACTTGAATCTACCTTTGCTATCACTTGAGGAATCAGCAGCAACCAACATCAGCCGGGCAAAGGAAGGTTTGTCCATGTTAATAGAAAGTCCTGTGTACACCATACATTACTATTGGAGGAAGTTTGATGATGCCTACATGAGACCTATATTTGGGGGACCTCATCGAAACCGGTCAGAGTGCTAG 1560 0.4064 MVLLLLNLAHDHAQVVPISLFVAVLCLCLLIGHLLEENRWVNESIVAILIGCIAGMILLFITKGKSSHILTFNEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFISSFVITGGSWWLFPKLNFLGLTGRDYLAIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKVDVSRLDARTLRGIGDFLYLFSTSTGLGVIAGLLTAYILKALSFGRHSSVREIALMVLMAYLSYMLSELFELSGILTVFFCGIFMSHYAWHNVTEISRITTRHVFASLSFIAETFIFLYVGMDALDMEKWKMNQLSFGNLIGIYSCLILLILLGRAAFVFPLSALSNYMNRRADQASSITFKQQIIIWWAGLMRGAVSIALAFKQFTFSGVTSDPVNATMITNTIIVVLFSTLVFGCFTKPLIRYLLPHNATSINVSHEESGPPAEDLNLPLLSLEESAATNISRAKEGLSMLIESPVYTIHYYWRKFDDAYMRPIFGGPHRNRSEC 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi9g00113 519 PRINTS Na+/H+ exchanger signature 90 104 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi9g00113 519 PRINTS Na+/H+ exchanger signature 105 113 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi9g00113 519 PRINTS Na+/H+ exchanger signature 76 87 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi9g00113 519 PRINTS Na+/H+ exchanger signature 145 155 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi9g00113 519 PANTHER SODIUM/HYDROGEN EXCHANGER 11 512 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Sebi9g00113 519 Pfam Sodium/hydrogen exchanger family 22 435 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Sebi9g00113 519 Gene3D - 137 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi9g00113 Sebi-Chr9 1726562 1731185 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi9g00113 7 519 Antiporters AT5G55470 72.587 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi9g00113 - - gmx:100813332 881.708