Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi9g00103 ATGTGGGGTGTATGGCCCGTTTTACGTGATTTTGTCTTTCCACTAATGGTGGAAGCTGCCATGATGATCAAGGGCGTCCCAAAAAAAGTTGAAGAAATGAAAAATGCACTAAAAAAGCTTCAACACTTCATTCATGAAGAAGATAAAAATGATGCTGCAACAGAGGAAGATAAGAAAAAGGTGAAGCAGCTGATAGAAGCAGCTTTTCGCATGGAAGATATCATTGATGAATATTTGATCATTGGAGAGCAAGAGTCTCGTGATCCTGGATGTGCAGCTTTACCAGATGATGCTGCTGACTTCCTCAAAACCATGTCCCTTCGTCTTCAAATTGCTTATAAGATTCAATACATTAAATCACAACTTCCTGAGATTGAGGAAAAAAGTAAAAGTGATGGTGGCTCCAAAATCCAATCTTCATTGGAACAAGGACCAAGCAATTCTGGTGGAAACCAAAATGTGACATTGCAGAACCTTCGAGAGGCTCCCCTTTACATGGAGGAAAGTGATTTTGTGGGGTTTGAAACCCCAACAGCTGAATTGATTGATTGGTTAGAGAATGGAAAAGCAGAACGCACTGTCATCTTTGTGGTAGGAATGGGAGGGCAAGGGAAAACCACTCTTGTCAAGAAAGTTTTTGACAACAAGAAGATGATTGGGAAGTTTGATCATCGTGCATGGATCACAGTGTCTCAGGACTACACTATAGAAGGGGTGCTGAAGGACATGTTGGTGAAGTTTTACAAACAAAAAGAAGCAGATCCTCCTCAGAGTATTTTCGCAATGGATAGAAGGTCACTGATTGAAGAAGTGAGAAACTACTTGCAAAAAGGGAGGTATGTTGTGGTATTTGATGATGTATGGAATGTAAATTTTTGGGATGAGATTGAATTTGCTGTAGTTGATAAGAAAAATAAAAGTAGGATAATAATCACAACAAGGAGAACTGATGTTTCCATGTCTTGTAAGAAATCTTCATTTGTTCAAGTGCATAAGCTGCAACCTTTAACTGAAAAAGAATCTTTGGATTTGTTCTATAAGAAGGCATTCTTTAGCAATAATGGATGTTGTCCTGAAAACCTTAGGACTATATCTGCTGAGATTGTTAAAAAATGCAAGGGTTTACCTCTAGCAATTGTGGCCATTGGTGGTGTTTTAGCTGGCAGGGAGAGTGAAGATGTATCTGAATGGGAAAGGTTTAGTGAAAATCTAAGTATAGAGCTTGAGAAGAATTCCCGTTTAGATGATATAAGGAAGATTTTAGAAGGGTTTGTGAAAGAGGAAAAGGGGATGGAGAGTTTGGAGAAAGTTGCAGAAGGATATTTAAAAGAGTTGATCCTAAGAAGTTTGGTGCAAGTATCTTCATCTAGCATTGATGGCAAAGTTAGAAGTTGTCAAGTTCATGACCTAATACGTGAGATGATCCTTAGAAAATTTGAGGATTTAAGCTTTGGCCAATTTATTGGTGATGATGATAAGTCAAACTTAAGTGGGATAAGTAGGCACCTATCAATAGCAACCACTTCCAAAGATTTAACAGGAACCATTGAGAGCTCCCAAGTTCGGTCATTGCATTTCTTCAATGAGGTAGAATTACCTGAATTCCTTATCAGGAGAATCCCTATTAAATACATGCTTAAGGTACTTGATTTTGAAGGTGCTAAATTTAATTATGTCCCTGAAAACTTGGGGAATTTGATCCACTTGAAATATTTAAGCTTCAGGAATACATGGCTACAAGATCTTCCAAAATCCATTGGTAAGCTGCAGAACCTGGAGACATTGGATCTAAGGGCAACACATGTGCATGAGATACCAAAGGAGATTAGCAAGCTTAGAAAGCTACAACATCTACTAGGTGATTTTATGTCTTTGATTCAATTAAAGGATAGTATTGGAGGCATGGCATCCCTACAAACTCTACATAAGGTGAAAATAGGTGAATATGATGATGTAGAGATAATTATAGAGCTGGAAAAGTTGGTGAAGTTAAGGGAGTTGAGATTGACTTTACATTCATCTGATCGAAAACATGCAGTCTTTCTATGTTCCTCAATAAATAAGATGCTACACTTGGTGAAATTACATGTTGAATTCACTTGTGTAATTGAAGCCCCTACTTTGCATTTTATTTCATCCCAACTTAAGCTTCAAAAGCTTTGTCTAGATGGGGAGTTATATAAGTTACCAAAGTGGATTCCAAAGCTTCAAAATCTTGTCAAGTTGACCTTGATAAACTCCAACTTAACTAAGGATCCATTGAAATCACTAAATATGCCAAACTTGTTGTTCCTTGCTATCCAAGAGAGTGCTTATGAAGGTGGAAGTTTGCATTTTCAAAATGGAAGGTTTCAGAAACTAAAGGAACTAGAACTGGCACTTTTGGATAACTTGAATTCCATTGTTATTGACAAAGGAGCACTACATTCTTTGAAAAAGCTTCAATTGATGGGGATCACCCAACTCAAAACAGTACCTACTGGCTTCCAGCACTTGAAGAAGCTTGAAGTTCTTGATATTGTGATTATGCCAACTGAATTTGTGCAGAGCATTGATCCTGATGGAGGTCAAGAGCATCGGATCATCGAGCATGTACCCCTTGTAACTATTCGTTGA 2616 0.3792 MWGVWPVLRDFVFPLMVEAAMMIKGVPKKVEEMKNALKKLQHFIHEEDKNDAATEEDKKKVKQLIEAAFRMEDIIDEYLIIGEQESRDPGCAALPDDAADFLKTMSLRLQIAYKIQYIKSQLPEIEEKSKSDGGSKIQSSLEQGPSNSGGNQNVTLQNLREAPLYMEESDFVGFETPTAELIDWLENGKAERTVIFVVGMGGQGKTTLVKKVFDNKKMIGKFDHRAWITVSQDYTIEGVLKDMLVKFYKQKEADPPQSIFAMDRRSLIEEVRNYLQKGRYVVVFDDVWNVNFWDEIEFAVVDKKNKSRIIITTRRTDVSMSCKKSSFVQVHKLQPLTEKESLDLFYKKAFFSNNGCCPENLRTISAEIVKKCKGLPLAIVAIGGVLAGRESEDVSEWERFSENLSIELEKNSRLDDIRKILEGFVKEEKGMESLEKVAEGYLKELILRSLVQVSSSSIDGKVRSCQVHDLIREMILRKFEDLSFGQFIGDDDKSNLSGISRHLSIATTSKDLTGTIESSQVRSLHFFNEVELPEFLIRRIPIKYMLKVLDFEGAKFNYVPENLGNLIHLKYLSFRNTWLQDLPKSIGKLQNLETLDLRATHVHEIPKEISKLRKLQHLLGDFMSLIQLKDSIGGMASLQTLHKVKIGEYDDVEIIIELEKLVKLRELRLTLHSSDRKHAVFLCSSINKMLHLVKLHVEFTCVIEAPTLHFISSQLKLQKLCLDGELYKLPKWIPKLQNLVKLTLINSNLTKDPLKSLNMPNLLFLAIQESAYEGGSLHFQNGRFQKLKELELALLDNLNSIVIDKGALHSLKKLQLMGITQLKTVPTGFQHLKKLEVLDIVIMPTEFVQSIDPDGGQEHRIIEHVPLVTIR 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi9g00103 871 FunFam Probable disease resistance protein At1g61300 154 326 - -
Sebi9g00103 871 PRINTS Disease resistance protein signature 274 288 - -
Sebi9g00103 871 PRINTS Disease resistance protein signature 194 209 - -
Sebi9g00103 871 PRINTS Disease resistance protein signature 587 603 - -
Sebi9g00103 871 PRINTS Disease resistance protein signature 372 386 - -
Sebi9g00103 871 Gene3D - 156 331 IPR027417 -
Sebi9g00103 871 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 422 IPR027417 -
Sebi9g00103 871 Gene3D Ribonuclease Inhibitor 510 851 IPR032675 -
Sebi9g00103 871 Pfam Rx N-terminal domain 13 87 IPR041118 -
Sebi9g00103 871 MobiDBLite consensus disorder prediction 134 154 - -
Sebi9g00103 871 SUPERFAMILY L domain-like 467 844 - -
Sebi9g00103 871 MobiDBLite consensus disorder prediction 128 154 - -
Sebi9g00103 871 PANTHER DISEASE RESISTANCE PROTEIN RP 41 811 IPR044974 GO:0006952
Sebi9g00103 871 Gene3D - 335 423 IPR042197 -
Sebi9g00103 871 Gene3D - 7 112 - -
Sebi9g00103 871 Pfam NB-ARC domain 176 422 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi9g00103 Sebi-Chr9 1602011 1604729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi9g00103 194 390 WRKY Transcription Factor Family AT5G45050 31.343 2.27e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi9g00103 K13457 - gmx:100819372 770.385