Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi9g00095 ATGCCTAGTGTTAAGCCTGATCAATCTGACAAAGACGCAGAACCATTTGTTGAAATTGATCCAACTGGAAGATATGGTAGATACAGTGAACTATTGGGATCAGGTGCTGTGAAAAAAGTGTATAGGGCATTTGATCAAGAAGAAGGGATAGAGGTGGCTTGGAACCAAGTGAAACTTAGGAACTTCAGTGATGACCCTGCCATGGTGGAAAGGCTTTACTCTGAAGTGAGATTGCTCAGAAGCTTGACCAACAAAAACATCATTGCCCTTTATAGTGTTTGGAGGGATGAGCAACATAACACTCTGAATTTCATCACTGAGGTTTGCACCAGTGGGAATTTGAGGGAGTACAGGAAGAAGCACAAGCATGTGTCCATCAAGGCTCTGAAGAAGTGGTCAAAGCAGATTTTGGAAGGGTTGAATTATTTGCATCTGCATGACCCCTGTATCATTCATAGAGACCTCAATTGCAGCAATGTCTTTGTCAATGGGAATACTGGCCAGGTTAAGATTGGTGACTTTGGTTTGGCAGCAATTGTGGGCAAGAACCACTCTGCACATTCAATTCTTGGGACACCAGAATTTATGGCACCTGAGTTATATGATGAGGACTACACAGAAATGGTGGACATATACTCATTTGGGATGTGTGTGTTAGAGATGGTAACACTAGAGATTCCTTATAGTGAGTGTGACAATGTTGCCAAGATATACAAGAAGGTGTCTTCAGGTCTGAGACCACAGGTCTTGAACAAGATAAAAGATGCAGAGGTGAAGGCCTTCATTGAGAGATGTCTTGCTCAGCCAAGGGCTAGACCTTCTGCTGCTGAGTTGCTTAAGGACCCTTTCTTTGATGTGCTTGATTATGATCAAAATGATGACTCTGCTAGCTAG 894 0.4284 MPSVKPDQSDKDAEPFVEIDPTGRYGRYSELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRNFSDDPAMVERLYSEVRLLRSLTNKNIIALYSVWRDEQHNTLNFITEVCTSGNLREYRKKHKHVSIKALKKWSKQILEGLNYLHLHDPCIIHRDLNCSNVFVNGNTGQVKIGDFGLAAIVGKNHSAHSILGTPEFMAPELYDEDYTEMVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSSGLRPQVLNKIKDAEVKAFIERCLAQPRARPSAAELLKDPFFDVLDYDQNDDSAS 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi9g00095 297 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Sebi9g00095 297 PIRSF TyrPK_CSF1-R 25 131 - -
Sebi9g00095 297 PIRSF TyrPK_CSF1-R 118 281 - -
Sebi9g00095 297 Gene3D Transferase(Phosphotransferase) domain 1 109 288 - -
Sebi9g00095 297 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 11 285 - -
Sebi9g00095 297 SUPERFAMILY Protein kinase-like (PK-like) 22 285 IPR011009 -
Sebi9g00095 297 CDD STKc_WNK 24 284 - -
Sebi9g00095 297 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi9g00095 297 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi9g00095 297 FunFam Probable serine/threonine-protein kinase WNK1 10 107 - -
Sebi9g00095 297 FunFam probable serine/threonine-protein kinase WNK9 109 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi9g00095 Sebi-Chr9 1449671 1450810 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi9g00095 8 285 MAP Kinase Kinase Kinase AT5G55560 83.813 0.0 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Sebi9g00095 Pkinase 1.2e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi9g00095 K08867 - gmx:100782039 567