Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi9g00094 ATGCAAACTTCTCAGAAACATGAAATTACTTATGGCTCTGGCAGGTTCTATGTTGAGCCTGTACAAAATCTGGAGTCATATTGCTTTCCTTCAAGTGAGAACCTAGAGAATTACTGTTCCTCTGATAACAGTTGCCAAACAACCTATCCTTCTGTCCAGACTTTAGAACAATATGGCACCCTTGAATCTGCTTCAACAAGCAACAGTTTCCCTTACCAAAATTCTCCATCTGCTGTCAGTTTCTCATCTAACAATAGTCCAGTGTCAAAGGTAGAGTCAAACTCATATGTGTTAAGGCCACAGAATTCTCTTGAAATTGTTAATGGCTCACCTGAAGATGATTCTTACTTGACACATGACCTTGATGACCTGACACATAAGATAAGAGAACTGGAAACTGCTATGCTGGGACCTAATGCAGATGTGCTAGATATATATGATGCTGTAATTCCAGAAGAATCTGATTCATTTTTGTTGGAGGCAGAGAAGTGGAAGAAATTGATGGAGATGGTATCTAGAGGGGATTTGAAAGAGATGCTTTATACTTGTGCAAAAGCAATGGCTGTGAATGATATGGAGACAACTGAATGGCTGGTGTCAGAGTTGCGCAAAATGGTGTCCATTTCAGGCAATCCAATCCAACGATTGGGAGCATACATGTTGGAGGCTCTTGTTGCAAGGATGGCCTCTTCAGGAAGCATAATCTACAAATCCTTAAAGTGTAGTGAGCCTACTGGTAATGAACTACTTTCATACATGCATGTACTTTATGAAATATGCCCATACTTCAAGTTTGGGTATATGTCAGCAAATGGGGCAATTGCAGAGGCTATGAAGGAAGAAAGTGAAGTCCACATAATTGATTTTCAGATTAACCAGGGAACCCAGTGGGTGAGCCTAATCCAGGCTCTTGCTCACCGACCTGGAGGACCCCCAAAGATCAGAATAACAGCTGTTGATGACTCAGTTTCAGCTTATGCCAGGGGAGGGGGACTTGATATTGTGGGGAAAAGGCTATCAACACTTGCACAGTCATGTCATGTACCCTTTGAATTCCATGCTGTCAGAGCTGCAGCTTCTGAGGTGCAACTTGAAGACTTTGAGCTTCGACCTGATGAAGCTGTGGCAGTGAATTTTGCCATTATGCTGCACCATGTGCCAGATGAAAGTATTAACAGTCATAATCATCGTGACCGGTTGTTGAGATTGGCCAAGCACTTGTCTCCTAAGGTAGTGACTCTGGTTGAGCAAGAATTTAATACCAACAATGCTCCATTCTTGCAGCGTTTCTTTGAGACAATGAACTACTACTTGGCTATTTTTGAATCACTTGATGTGGTTATGCCAAGGGAGCACAAAGAGAGGATTAATGTGGAACAGCATTGTTTGGCTCGAGAAGTTGTCAACTTAATAGCATGTGAAGGAGCAGAAAGAGTGGAACGTCATGAGCTTCTGAATAAGTGGAGAATGCGTTTTACAATGGCTGGTTTTACACCTTATCCATTGAGCTCCTTCATTAATTCTTCAATCAAGGATCTTCTGGAGAGCTACCGCGGACATTATACTCTAGAAGAGACAGATGGTGCACTATATCTTGGTTGGAAGAATCAAGTTCTTATTGCTTCTTGTGCTTGGAGATGA 1641 0.4199 MQTSQKHEITYGSGRFYVEPVQNLESYCFPSSENLENYCSSDNSCQTTYPSVQTLEQYGTLESASTSNSFPYQNSPSAVSFSSNNSPVSKVESNSYVLRPQNSLEIVNGSPEDDSYLTHDLDDLTHKIRELETAMLGPNADVLDIYDAVIPEESDSFLLEAEKWKKLMEMVSRGDLKEMLYTCAKAMAVNDMETTEWLVSELRKMVSISGNPIQRLGAYMLEALVARMASSGSIIYKSLKCSEPTGNELLSYMHVLYEICPYFKFGYMSANGAIAEAMKEESEVHIIDFQINQGTQWVSLIQALAHRPGGPPKIRITAVDDSVSAYARGGGLDIVGKRLSTLAQSCHVPFEFHAVRAAASEVQLEDFELRPDEAVAVNFAIMLHHVPDESINSHNHRDRLLRLAKHLSPKVVTLVEQEFNTNNAPFLQRFFETMNYYLAIFESLDVVMPREHKERINVEQHCLAREVVNLIACEGAERVERHELLNKWRMRFTMAGFTPYPLSSFINSSIKDLLESYRGHYTLEETDGALYLGWKNQVLIASCAWR 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi9g00094 546 ProSiteProfiles GRAS family profile. 167 546 IPR005202 -
Sebi9g00094 546 Pfam GRAS domain family 176 546 IPR005202 -
Sebi9g00094 546 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 122 541 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi9g00094 Sebi-Chr9 1414056 1415696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi9g00094 1 546 GRAS Transcription Factor Family AT1G50600 56.987 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi9g00094 GRAS 3.1e-133 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi9g00094 - - gmx:100785400 956.822