Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi9g00086 ATGTCGTTTGAGTTTGACTTCCCATTCTATTCTCTTATACACCCTACCAGTAGTTTTCTTACTTCTTTCCTGAAAATAAAGCTGGTTTTCTTGCGTGGCATTGGCTTATCCAGTTTCCTCCATCTATTGTTGTTAGTGACGCTTTTAGTGTCATGGTTGCGGAGGAAAGTCAAAGTTGAAGCAAGAGATGGAGACAATTCCAAAGAGAAAGTAAAGAACACCTTGTTTACAAGGACTCTGCTTTGTTCTCTGGGTGTTTCTGCTTTCAATCTGCTGCTCTGTTTGTATGATTGCTTCTGTTGGTATAGAAATGGTTGGTCAGATGAAAAGCTCATGACCCTTTTGGATTCGGCGCTCAAAACTGTTGCTTGGGGTGCTGTTTGTGTTTACCTGCACAGGGAACTCTTCAGTTCAGGTGAAAGGAGATTACCATTCTTCCTCAGAATTTGGTGTGTCATCTATCTCTTCATTTCCTGTTATTGCTTAATAGTAGACTTTGTTCTCTATGAAAAGGGCGCTGCTTTGCCAATTCAGTACTTAGTTTCTGATGTTTTCTCTTCTTGTGTGGGTTTATTCATATGTTACTTGACTTTTTTTGTGAAAATTGAGGGTGGAGTAGGTGATAGCACTCTTCAAGAACCTCTTTTGAATGGTGATAGTAATGTGTCAGGGAAAAAAGAAACCAAAGGGGTTGAGACTGTTACCCCTTACTCTAGTGCTGGAATTTTCAGCATTCTTACCTTCTCTTGGGTTGGTCCTCTGATTGCTGTTGGAAAGAAGAAAACTTTAGACCTTGAGGATGTCCCCCAACTTGACACAAGAGACAGTTCAGTTGGAGCTTTTCCAACTTTCAGGGATAAGCTTGAAGCAGATTGTGGGGATATTAACAAAGTGGCCACACTTAAGCTAGTGAAGTCATTAGTATTCTCAGCCTGGAAAGAGATTCTTTTGACAGCTATCCTTGCATTGGTAAACACATTGGCTTCTTATGTGGGTCCCTATCTTATTAATGCTTTTGTTCAGTACCTTAATGGAAAACAAAATTTTGAAAATGAGGGTCTTGTTTTGGTGTCAGCATTTTTTGTGGCAAAGCTTGTGGAGTGTCTGTCATGGAGGCACTGGTTCTTTAGGTTGCAGCAGGTTGGAATTCGAATCCAAGCACTGCTTGTGACAATCATCTATAATAAATCTTTAACCCTTTCATGTCAATCCAAGCAGGGTCACACTACTGGGGAGATAATCAATTTGATGACTGTTGATGCTGAAAGAGTTGGTGACTTCAGTGTGCAATTGCATGATCTGTGGTTGGTAGTTCCTCAGGTTTTAATTGGTTTGTTGATTTTGTATAAAAATCTTGAGCTTGCATCAATTTCTGGGTTTGTTGCAACTGTGATTGTAATGTTAGGAAATATTCCCTTGGGGTCAATCCAAGAGAAGTTTCAAGACAAGTTGATGGAGTCAAAAGATAAAAGAATGAAGACCACATCTGAAATTTTAAGGAACATGAAGATTCTCAAACTGCAAGGATGGGAAATGAAGTTTCTGTCTAAGATAACTGAACTCAGGAGGACTGAGCAAGGCTGGTTGAAAAAATCTGCATGCACTTTAGTCATAACCACGTTTGTATATTGGAGTACCCCAACATTTGTGTCTGTGGTTACTTTTGGTACTTGTATGCTTATAGGGATCCCACTTGAATCAGGGAAGATCTTATCTTCAATTGCAACATTCCAGAATCTTCAAGAACCCATTTATAATCTTCCAGACACAATTTCATTGATGATACAAACTAAGGTCTCTCTTGACAGGATTGCATCTTTCCTTTGTCTAGATGACATGCAATCTGATATTGTGGAGAAGCTTCCACAGGGTAGTTCTGATACAGCAATTGAAGTGGTTGATGGAAATTTCTCTTGGGATTTATTTTCACCTAATGCAACATTGAAAAATATAAATCTCAGAGTTTTTCATGGCATGAAGGTTGCTATTTGTGGTACTGTTGGATCAGGCAAGTCTGCATTACTTTCTTGCATATTGGGAGAAGTACCAAAGATATCAGGGACCCTGAAGGTGTGTGGAACAAAGGCCTATGTGGCTCAGTCTCCATGGATACAAAGTGGCAAGATAGAAGAGAACATATTATTTGGTAAAGAGATGGATAGGGAAAAGTATGAGAAGGTTTTAGAAGCATGTTCCCTAAAGAAGGATTTAGATATTTTATCATTTGGAGATCAGACAATTATAGGGGAAAGGGGAATAAATTTGAGCGGTGGACAGAAACAAAGAATACAAATTGCTCGAGCCCTATACCAAGATGCTGATATATATCTATTTGATGATCCATTTAGTGCTGTGGATGCTCATACAGGATCTCACCTCTTTAAGGAATGCTTGTTGGGTCTTTTAAATTCAAAGACAGTGGTTTATGTCACTCATCAAGTAGAGTTCTTACCCTGTGCTGACCTTATCTTGGTCATGAAGGATGGGAAAATTACTCAATGTGGAAAGTATTATGATCTTCTCAACTCAGGCACTGATTTCATGGAACTTGTTTGTGCTCATAGAGAAGCTTTGTCTGCACTTGATTCATTAGATGGAGACACAGTATCTGATAAAATAAGTACATCAAAACAGAATGTTATTGTCTCTCTTTCTCATGATGTTGAAGAAAAAGATGTAAAGAACGTAGTTCAAAATGGTGGAACAGATGACAAATGTGATCCAAAAGGCCAGCTTGTCCAAGAAGAAGAAAGAGAGAAAGGTAAAGTTGGGTTTTCAGTCTATTGGAAATATATCACAACAGCATATGGAGGAGCACTTGTACCACTCATATTTCTTGCTGAAATTATGTTTCTACTTCTTGAAATTGCAAGCGACTTTTGGATGGTTTGGGCAACTCCCATTTCAACAGATGAGGAGCCACCTGTTGGAGGAAGGACACTTCTAGTTGTCTATGTAGCTTTGGCCATAGGAAGTTCCTTATGTGTCCTTGCCAGAGCAACACTTATTGTCATAGCTGGTTATAAGACAGCTACTCTACTCTTCAATAAATTGCATTTAAGCATTTTCCGTGCTCCAATGTCTTTTTTTGATGCCACCCCAAGTGGGAGAATCCTTAATAGGGCTTCTACTGACCAAAGTGCAGTGGATACAGACATTCCTTCTCAGGCTGGATCATTTGTTTGCTCCATGATCCATCTCCTCGGAATTATAGTGGTGATGTCTCAGGTTGCATGGCAAGTTTGCATTGTCATTATTCCTGTGATAGCAATTAGTATCTGGTATCAGCAATATTACTTACCATCAGCCCGGGAACTATCTCGTTTAGTTGGAGTGTGCAACGCTCCTGTCATTCAACATTTTTCTGAAACAATTTCAGGTACTTCAACCATTAGGAGCTTTGATCAAGTGTCAAGGTTTCAGCAAACAAATATGAAACTGATGGATGGATATTCTCGCCCTAAGTTCAATATAGCTGCTGCTATGGAATGGTTGTGCTTCCGCTTAGATATGTTGTCTTTGATCACATTTGCCTTTTGCTTGATATTCTTGATATCTGTTCCAGAGGGGGTCATAAATTCAGGTGTTGCTGGGTTAGCTGTAACCTATGGCCTTAGTTTGAACATTGTACAAGCATGGATGATATGGGAACTTAGCAACTTGGAGACCAAAATTATATCAGTGCGTTATGCTCCACATATGCCACTTGTGTTGCATGGCCTTACATGCACATTTCTTGGAGGAAAGAAAACTGGAATTGTTGGGAGAACCGGAAGTGGTAAATCCACTCTCATACAAGCACTTTTTCGAATCGTTGAACCTACTTTTGGGAGAATCATGATTGATGGCATCAACATCTCTTCCATTGGACTTCATGATTTGAGGTCTAGATTGAGCATTATTCCTCAGGATCCAACAATGTTTGAAGGTACTGTGAGAAGTAACCTTGACCCACTAGAAGAGTACACAGATAATCAAATTTGGGAGGCCCTGGATAAGTGTCAACTTGGAGATGAAGTTAGAAGGAAAGAAGGAAAGTTAGATTCTGCAGTTAGTGAGAATGGTGAGAATTGGAGTATGGGTCAGAGGCAGTTGGTATGTTTAGGTAGGGTGCTGCTTAAGAAGAGTAAGGTTTTGGTGTTAGATGAAGCTACTGCATCAGTTGACACAGCTACAGATAATTTGATTCAGCAAACTCTTAGGCAACATTTCTCTGATTGCACAGTCATTACCATTGCACATAGAATAACTTCTGTTATTGACAGTGACATGGTTCTATTACTTAATCAAGGACTTATTGAGGAGTATGATTCCCCAACAAGATTGCTAGAGGACAAGTTATCGTCTTTTGCCCAACTTGTTGTAGAGTATACCACAAGGTCCAACTCCAGTTCTGACCGACAAGAATAA 4410 0.3957 MSFEFDFPFYSLIHPTSSFLTSFLKIKLVFLRGIGLSSFLHLLLLVTLLVSWLRRKVKVEARDGDNSKEKVKNTLFTRTLLCSLGVSAFNLLLCLYDCFCWYRNGWSDEKLMTLLDSALKTVAWGAVCVYLHRELFSSGERRLPFFLRIWCVIYLFISCYCLIVDFVLYEKGAALPIQYLVSDVFSSCVGLFICYLTFFVKIEGGVGDSTLQEPLLNGDSNVSGKKETKGVETVTPYSSAGIFSILTFSWVGPLIAVGKKKTLDLEDVPQLDTRDSSVGAFPTFRDKLEADCGDINKVATLKLVKSLVFSAWKEILLTAILALVNTLASYVGPYLINAFVQYLNGKQNFENEGLVLVSAFFVAKLVECLSWRHWFFRLQQVGIRIQALLVTIIYNKSLTLSCQSKQGHTTGEIINLMTVDAERVGDFSVQLHDLWLVVPQVLIGLLILYKNLELASISGFVATVIVMLGNIPLGSIQEKFQDKLMESKDKRMKTTSEILRNMKILKLQGWEMKFLSKITELRRTEQGWLKKSACTLVITTFVYWSTPTFVSVVTFGTCMLIGIPLESGKILSSIATFQNLQEPIYNLPDTISLMIQTKVSLDRIASFLCLDDMQSDIVEKLPQGSSDTAIEVVDGNFSWDLFSPNATLKNINLRVFHGMKVAICGTVGSGKSALLSCILGEVPKISGTLKVCGTKAYVAQSPWIQSGKIEENILFGKEMDREKYEKVLEACSLKKDLDILSFGDQTIIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGLLNSKTVVYVTHQVEFLPCADLILVMKDGKITQCGKYYDLLNSGTDFMELVCAHREALSALDSLDGDTVSDKISTSKQNVIVSLSHDVEEKDVKNVVQNGGTDDKCDPKGQLVQEEEREKGKVGFSVYWKYITTAYGGALVPLIFLAEIMFLLLEIASDFWMVWATPISTDEEPPVGGRTLLVVYVALAIGSSLCVLARATLIVIAGYKTATLLFNKLHLSIFRAPMSFFDATPSGRILNRASTDQSAVDTDIPSQAGSFVCSMIHLLGIIVVMSQVAWQVCIVIIPVIAISIWYQQYYLPSARELSRLVGVCNAPVIQHFSETISGTSTIRSFDQVSRFQQTNMKLMDGYSRPKFNIAAAMEWLCFRLDMLSLITFAFCLIFLISVPEGVINSGVAGLAVTYGLSLNIVQAWMIWELSNLETKIISVRYAPHMPLVLHGLTCTFLGGKKTGIVGRTGSGKSTLIQALFRIVEPTFGRIMIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYTDNQIWEALDKCQLGDEVRRKEGKLDSAVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLNQGLIEEYDSPTRLLEDKLSSFAQLVVEYTTRSNSSSDRQE 1469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi9g00086 1469 CDD ABCC_MRP_domain2 1226 1439 - -
Sebi9g00086 1469 Gene3D - 1226 1459 IPR027417 -
Sebi9g00086 1469 FunFam ABC transporter C family member 3 1210 1456 - -
Sebi9g00086 1469 SUPERFAMILY ABC transporter transmembrane region 305 604 IPR036640 GO:0005524|GO:0016020
Sebi9g00086 1469 SMART AAA_5 1247 1432 IPR003593 GO:0016887
Sebi9g00086 1469 SMART AAA_5 657 830 IPR003593 GO:0016887
Sebi9g00086 1469 FunFam ABC transporter C family member 5 615 862 - -
Sebi9g00086 1469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 629 851 IPR027417 -
Sebi9g00086 1469 Pfam ABC transporter 648 782 IPR003439 GO:0005524
Sebi9g00086 1469 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1223 1455 IPR003439 GO:0005524
Sebi9g00086 1469 FunFam ABC transporter C family member 10 299 612 - -
Sebi9g00086 1469 Pfam ABC transporter transmembrane region 316 577 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi9g00086 1469 Pfam ABC transporter transmembrane region 945 1185 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi9g00086 1469 CDD ABC_6TM_ABCC_D1 317 604 IPR044746 GO:0140359
Sebi9g00086 1469 CDD ABCC_MRP_domain1 630 830 - -
Sebi9g00086 1469 Gene3D - 611 891 IPR027417 -
Sebi9g00086 1469 CDD ABC_6TM_ABCC_D2 941 1228 IPR044726 GO:0140359
Sebi9g00086 1469 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 630 853 IPR003439 GO:0005524
Sebi9g00086 1469 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 237 1228 - -
Sebi9g00086 1469 ProSitePatterns ABC transporters family signature. 755 769 IPR017871 GO:0005524|GO:0016887
Sebi9g00086 1469 Pfam ABC transporter 1239 1386 IPR003439 GO:0005524
Sebi9g00086 1469 SUPERFAMILY ABC transporter transmembrane region 928 1228 IPR036640 GO:0005524|GO:0016020
Sebi9g00086 1469 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 316 596 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi9g00086 1469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1219 1445 IPR027417 -
Sebi9g00086 1469 Gene3D ABC transporter type 1, transmembrane domain 904 1225 IPR036640 GO:0005524|GO:0016020
Sebi9g00086 1469 Gene3D ABC transporter type 1, transmembrane domain 295 610 IPR036640 GO:0005524|GO:0016020
Sebi9g00086 1469 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 943 1223 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi9g00086 1469 FunFam ABC transporter C family member 5 904 1233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi9g00086 Sebi-Chr9 1320844 1326673 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi9g00086 630 859 Calmodulin-binding Proteins AT2G36910 30.000 6.48e-23 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi9g00086 - K05666 gmx:100775358 2245.7