Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi9g00083 ATGACCCTTTTGGATTTGGGGCTTAAAACACTTGCTTGGGGTGCTGTTTGTGTTTGCCTTCCCAGGGAACTCTTCAGTTCAAGTCAAAGAAGATTAGCATTCTTTTTTAGAATTTGGTGTGCCTTCTACCTCTTTGTTTCCAGTTATTGCTTTATAGTAGACATTGTTCTCTATGAAAAGCATGCTTCTTTGCCAATTCAGTACTTAGTTTCTGATGTTTTCTCTTCTTGTGTTGGTTTATTCATCTGTTACCTGACTTTTTTTGTGAAAATTGAGGGTAGAGTAGGAGATAGCACTCATCAAGAACCTTTTTTGAATGGTGATACAGTAGATAGTAATGTGCCAGCAACAAAAGAGATCAAGGGGGTTGACACTGTTACCCCTTACTCTAATGCTGGATTTTTCAGCAATCTTACCTTCTCTTGGGTTGGTCCTCTGATTGCTGTTGGAAAGAACAAAACTTTAGACCTTGAGGATGTCCCCCAACTTGACAGAAGAGACAGTTTAGTTGGATCTTTTCCAACTTTCAGGGACAAGCTTGAAGCAGATTGTGGGGATATTAACAGAGTGACCACACTTAAGCTAGTGAAGTCATTAATATTCTCAGCCTGGAAAGAGATTCTCTTGACAGCTATCCTTGCATTGGTAAACACATTGGCTTCATATGTGGGTCCCTATCTTATTAATGCTTTTGTTCAGTACCTTAATGGAAAGCAGAATTTTGAAAATGAGGGTCTTGTTTTAGTGTCAGCATTTTTTGTGGCAAAGCTTGTGGAGTGCATGTCAAGGAGGCACTGGCTCTTTAGGTTGCAACAGGTTGGAATTCGAATCCAAGCACTTCTTGTGACAATCATCTATAATAAAGCTTTGACCCTTTCATGTCAATCCAAGCAAGGCCACACTACTGGAGAGATAATCAATTTCATGACTGTTGATGCTGAAAGAGTAGGTGACTTCAGTTGGCACTTGCATGATCTGTGGTTGGTAGCTCTGCAGGTTTTAGTAGCCTTGTTGGTTTTGTACATAAATCTTGGACTTGCTTCAATTTCTGGGTTTGTTGCAACTGTCATTGTAATGTTGGCAAATATTCCATTGGGGTCAACCCAAGAGAAGTTTCAAGACAAATTGATGGAGTCAAGAGATAAAAGAATGAAGGCCACGTCTGAGATTTTAAGGAACATGAGGATTCTCAAACTACAAGGATGGGAAATGAAGTTTCTATCTAAGATAACTGAACTCAGGAAGACTGAGCAAGGCTGGTTGAAAAAATTTGTATACACTTTAGCCATGATCATATTTGTCTATTGGAGTGCCCCAGCATTTGTGTCTGTGGTTACTTTTGGTTCTTGTATGCTTATAGGGATCCCACTTGAATCAGGGAAGATCTTATCTGCACTTGCAACATTCCAGATTCTTCAAGAGTCCATTTATAATCTTCCAGACACACTTTCAATGATGGCACAAACTAAGGTTTCTCTTGATCGAATAGCCTCTTTCCTTTGTCTAGATGACATGCAATCTGATATTGTGGAGAAGCTTCCACAGGGTAGTTCTGATACAGCAATTGAAGTGGTTGATGGAAATTTCTCTTGGGATTTATTTTCACCTAATGCAACATTGAAAAATATAAATCTCAGAGTTTTTCATGGCATGAAGGTTGCTATTTGTGGTACTGTTGGATCAGGCAAGTCTGCATTACTTTCTTGCATATTGGGAGAAGTACCAAAGATATCAGGGACCCTGAAGGTGTGTGGAACAAAGGCCTATGTGGCTCAGTCTCCATGGATACAAAGTGGCAAGATAGAAGAGAACATATTATTTGGAAAAGAAATGGATAGGGAAAAGTATGAGAAGGTGCTAGAAGCTTGTTCCCTAAAGAAGGATCTAGATATTTTGCCATTTGGAGATCAGACAATTATAGGGGAAAGGGGAATAAATTTGAGTGGTGGACAGAAACAAAGAATACAAATTGCTCGAGCTCTATACCAAGATGCTGATATATATCTATTTGATGATCTGTTTAGCGCTGTGGATGCTCATACAGGATCTCACCTCTTTAAGGAATGCTTGTTGGGTCTTTTAAGTTCAAAGACAGTGGTTTATGTCACTCATCAAGTAGAGTTCTTACCTGCATCTGACCTTATCTTGGTCATGAAGGATGGGAAAATTACTCAATGTGGAAAGTATAATGATCTACTCAACTCAGGCACTGAGTTTATGGAACTTATTGGTGCTCACAGAGAAGCTTTGTCTGCACTTGATTCACTAGATGGAGACACGGTATCTGATAAAATAAGTACATCACAAAAGGATGTAAATGTCTCTCTTTCTCATGGTGTTAAAGAGAAAGAAGTAAATAAAGATGTGCAAAACAGTGGAACGGATGACAAATGTGAGCCAAAAGGCCAGCTTATTCAAGAAGAAGAAAGAGAGAAAGGTAAAGTTGGGTTTTTAGTCTATTGGAAATATCTCACAACATCATATGGAGGAGCACTTGTACCACTCATATTGCTGGCTGAAATTTTGTTTCAACTTCTTCAAATTGCAAGCAACTATTGGATGGCTTGGGCAACTCCCATCTCAAAAGATGTGGAGCCAGCTATTGGAGGAAGTACACTTCTAGTAGTCTATGTAGCTTTGGCCATAGGAAGTTCTTTATGTGTTCTTACCAGAGCAACACTTGTTGTCACAGCTGGTTATAAGACTGCTACTTTACTCTTCAATAAAATGCATCTCTGCATTTTCCGCGCTTCAATGTCATTTTTTGATGCCACTCCAAGTGGGAGGATCCTTAATAGGGCTTCTACTGACCAAAGTGCAGTGGATATAAATATCCCTTTCCAAACTGCATCATTTGCATGCTCCATGATCCATCTCCTTGGAATAGTAGTGGTGATGTCTCAGGTTGTATGGCAAGTTTTCATTGTATTTATTCCTATGACAGCAATCAGTATCTGGTATCAGCAATATTATTTACCATCAGCCCGGGAACTATCACGGTTCGTTGGAGTATGCAAAGCTCCTGTCATTCAACATTTTGCTGAAACAATTTCAGGTACATCAACCATCAGGAGCTTTGATCAAGTGTCAAGGTTTCAGCAAACAAATATGAAACTGATGGATGGATATTCTCGCCCCAAGTTCAATATAGCTGGTGCTATGGAATGGTTGTGCTTCCGCTTAGATATGATGTCTTCTATCACATTTGCTTTTTGCTTGATATTCTTGATATCTATTCCACAAGGAGTCATAGAATCAGGCATTGCTGGTTTAGCTGTAACATATGGTCTTAATCTGAACATTATACAAGCATGGATGATATGGGAACTTAGCAACTTGGAGACCAAACTTATATCAGTAGAAAGAATACTTCAGTATACTTCCATTCCTAGTGAACCTCCTCTTGTTATAGAGGAAAATCGCCCGCATACTTCTTGGCCATCATATGGCACAGTTGATATTCACAACTTGCAGGTGCGTTATGCTCCACATATGCCACTTGTGTTGCGGGGCCTTACTTGCACATTTCTTGGAGGAAAGAAAACTGGAATTGTTGGGAGAACGGGTAGTGGTAAATCAACTCTCATACAAGCACTTTTCCGAATTGTTGAACCTACTTTTGGGAGAATCATGATTGATGGCATCAACATCTCTTCCATTGGACTTCATGATTTGAGGTCTAGACTGAGCATTATTCCTCAAGATCCAACAATGTTTGAAGGTTCTGTGAGAAGTAACCTTGACCCACTAGAAGAGTACACAGATAACCAAATTTGGGAGGCCTTGGATAAGTGTCAACTTGGAGATGAAGTTAGAAGGAAAGAAGGAAAGTTAGATTCTGCAGTTAGTGAGAATGGTGAGAATTGGAGTATGGGTCAGAGGCAGTTGGTATGTTTAGGTAGGGTGCTGCTTAAGAAGAGTAAGGTTTTGGTGTTAGATGAAGCTACTGCATCAGTTGACACAGCTACAGATAATTTGATTCAGCAAACTCTTAGGCAACATTTCTCTGATTGCACAGTCATTACCATTGCACATAGAATAACTTCTGTTATTGACAGTGACATGGTTCTGTTACTTAATCAAGGACTAATTGAGGAGTATGATTCCCCAACAAGATTGCTAGAGGACAAGTTATCGTCATTTGCTCAACTTGTTGCAGAGTATACCACAAGGTCCAACTCCAGTTTTGACCAACTAAAATAA 4203 0.3957 MTLLDLGLKTLAWGAVCVCLPRELFSSSQRRLAFFFRIWCAFYLFVSSYCFIVDIVLYEKHASLPIQYLVSDVFSSCVGLFICYLTFFVKIEGRVGDSTHQEPFLNGDTVDSNVPATKEIKGVDTVTPYSNAGFFSNLTFSWVGPLIAVGKNKTLDLEDVPQLDRRDSLVGSFPTFRDKLEADCGDINRVTTLKLVKSLIFSAWKEILLTAILALVNTLASYVGPYLINAFVQYLNGKQNFENEGLVLVSAFFVAKLVECMSRRHWLFRLQQVGIRIQALLVTIIYNKALTLSCQSKQGHTTGEIINFMTVDAERVGDFSWHLHDLWLVALQVLVALLVLYINLGLASISGFVATVIVMLANIPLGSTQEKFQDKLMESRDKRMKATSEILRNMRILKLQGWEMKFLSKITELRKTEQGWLKKFVYTLAMIIFVYWSAPAFVSVVTFGSCMLIGIPLESGKILSALATFQILQESIYNLPDTLSMMAQTKVSLDRIASFLCLDDMQSDIVEKLPQGSSDTAIEVVDGNFSWDLFSPNATLKNINLRVFHGMKVAICGTVGSGKSALLSCILGEVPKISGTLKVCGTKAYVAQSPWIQSGKIEENILFGKEMDREKYEKVLEACSLKKDLDILPFGDQTIIGERGINLSGGQKQRIQIARALYQDADIYLFDDLFSAVDAHTGSHLFKECLLGLLSSKTVVYVTHQVEFLPASDLILVMKDGKITQCGKYNDLLNSGTEFMELIGAHREALSALDSLDGDTVSDKISTSQKDVNVSLSHGVKEKEVNKDVQNSGTDDKCEPKGQLIQEEEREKGKVGFLVYWKYLTTSYGGALVPLILLAEILFQLLQIASNYWMAWATPISKDVEPAIGGSTLLVVYVALAIGSSLCVLTRATLVVTAGYKTATLLFNKMHLCIFRASMSFFDATPSGRILNRASTDQSAVDINIPFQTASFACSMIHLLGIVVVMSQVVWQVFIVFIPMTAISIWYQQYYLPSARELSRFVGVCKAPVIQHFAETISGTSTIRSFDQVSRFQQTNMKLMDGYSRPKFNIAGAMEWLCFRLDMMSSITFAFCLIFLISIPQGVIESGIAGLAVTYGLNLNIIQAWMIWELSNLETKLISVERILQYTSIPSEPPLVIEENRPHTSWPSYGTVDIHNLQVRYAPHMPLVLRGLTCTFLGGKKTGIVGRTGSGKSTLIQALFRIVEPTFGRIMIDGINISSIGLHDLRSRLSIIPQDPTMFEGSVRSNLDPLEEYTDNQIWEALDKCQLGDEVRRKEGKLDSAVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVIDSDMVLLLNQGLIEEYDSPTRLLEDKLSSFAQLVAEYTTRSNSSFDQLK 1400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi9g00083 1400 Gene3D - 1135 1388 IPR027417 -
Sebi9g00083 1400 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 208 488 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi9g00083 1400 CDD ABC_6TM_ABCC_D1 209 496 IPR044746 GO:0140359
Sebi9g00083 1400 CDD ABCC_MRP_domain1 522 722 - -
Sebi9g00083 1400 Gene3D ABC transporter type 1, transmembrane domain 796 1133 IPR036640 GO:0005524|GO:0016020
Sebi9g00083 1400 Gene3D ABC transporter type 1, transmembrane domain 188 502 IPR036640 GO:0005524|GO:0016020
Sebi9g00083 1400 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1154 1386 IPR003439 GO:0005524
Sebi9g00083 1400 SUPERFAMILY ABC transporter transmembrane region 197 500 IPR036640 GO:0005524|GO:0016020
Sebi9g00083 1400 CDD ABCC_MRP_domain2 1150 1370 - -
Sebi9g00083 1400 Pfam ABC transporter 540 672 IPR003439 GO:0005524
Sebi9g00083 1400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 521 744 IPR027417 -
Sebi9g00083 1400 FunFam ABC transporter C family member 3 1135 1387 - -
Sebi9g00083 1400 ProSitePatterns ABC transporters family signature. 647 661 IPR017871 GO:0005524|GO:0016887
Sebi9g00083 1400 SMART AAA_5 549 722 IPR003593 GO:0016887
Sebi9g00083 1400 SMART AAA_5 1178 1363 IPR003593 GO:0016887
Sebi9g00083 1400 FunFam ABC transporter C family member 5 796 1133 - -
Sebi9g00083 1400 Gene3D - 503 760 IPR027417 -
Sebi9g00083 1400 FunFam ABC transporter C family member 5 507 754 - -
Sebi9g00083 1400 FunFam ABC transporter C family member 10 191 504 - -
Sebi9g00083 1400 CDD ABC_6TM_ABCC_D2 833 1127 IPR044726 GO:0140359
Sebi9g00083 1400 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 522 745 IPR003439 GO:0005524
Sebi9g00083 1400 Pfam ABC transporter transmembrane region 208 474 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi9g00083 1400 Pfam ABC transporter transmembrane region 836 1077 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi9g00083 1400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1141 1376 IPR027417 -
Sebi9g00083 1400 SUPERFAMILY ABC transporter transmembrane region 833 1133 IPR036640 GO:0005524|GO:0016020
Sebi9g00083 1400 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 129 1387 - -
Sebi9g00083 1400 Pfam ABC transporter 1170 1317 IPR003439 GO:0005524
Sebi9g00083 1400 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 835 1115 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi9g00083 Sebi-Chr9 1274159 1279713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi9g00083 522 779 Calmodulin-binding Proteins AT2G36910 29.137 3.05e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi9g00083 - K05666 gmx:100775358 2293.46