Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi9g00078 ATGGCAGATATTGTTATCTCCATTGTGGCCAAAGTCACCGAATATCTGGTGAAACCTGCAATAAGCCGAGGACGATACTTTCTTTGTGTTAGTAAAGTAATCAAAGATCTTGAGAATGAAACGAAGGAGCTGACATTTGAAAGTGCTGGCTTGAAAGATCGAGTTGAACTAGTCAAGGAAAGAGCTGAAGTTATTGAAAAACCAGTGGAGGAGTGGTTGAATGATGTGGAAAATCTCCTTAAAGAGGTGGCAGGTTTGGAGCAAAGCATGGGTGCAAACAACAATTGCTTTCAAGGATGGTGTCCAATTTGGAGAAGATATTGTTTATGCGAGCAAATGGTGGAGAAGATAGAAGCAATGAGGAAGTTTAAAGGCAAAAGTAATATTCAACCATTTTCTCACCCTGCTCCACTTCCAGGCATTCAGTATGGGTCATCTGAAAACATTATTTACTTTGAATCAACAAAAGTAGCTTATAATGAACTCTTGGAGGCACTTAAGGATGATAGCATCTACATGATAGGAGTATATGGAATGGGTGGATCTGGGAAAACAACTCTTGTAACAGAAGCTGGTAAAAAGGCTGAACAATTGAATTTGTTTGATAAGGTTATATTAATCACAGTGTCTCAAACCCCAAGCATCAGAGACGTTCAAGGAAAAATAGCAGATATGTTAAACTTGAAACTGGAGGAAGAAACTAAAGAGGGAAGAGCACAGCGAATATGGCAGAGTTTGAAAGAAAAGAAGCGAATTCTTGTCATAGTCGATGATTTATGGAGGAAATTTAATTTAGAGGATATTGGGATTTGCTTACAGAATGATAACAAGGGTGCGTGGAAAATTCTTATAACCACTCGAAATCAAAGTGTATGTACTTCAATGGACTGTCAAAAGAAGATTCATTTGGGGCTCTTATCTGAAGACGAGTCTTGGTCCTTGTTCCAAAAGCATGCAAACATTGATGATGAATTCTCTAAGTCACTAGATGATGTGCCAAGAAAACTTTGCAATGAATGTAAAGGACTACCCATAGCAATAGTAACTGTGGGATCTTCCTTAAAAGGAAAATCTAAAGATGAGTGGGAGGTAGCACTAAACAGCTTGAGGGATTCAGAGGCATTTAATGATCACGAAGGAGTGAGAGCAGCTTTATGTTGTCTCAAATTAAGCTATGATTATTTAGAAAACAATGAAGTACAGCTTCTCTTTTTGATGTGTTCTATGTTTCCAGAAGACTATAACATCTTAATAGAAGATTTGATCCAATTGGCAATTGGACTAGGTGTGGGAGGAAGATCTTCATTAAAGTCAATGAGGAGCTGGATCAAAGCAGGCATAAACAAACTTCTAGATTCTTGTTTGTTGATGAGTAATGACTACTTAATAATACATGGTCAGGAAAGCAAAGAATACATGAAGATGCATGATATGGTTCGTGAGGCAGCCTTATGGATAGCAAAGAAATTTGAGAATTGCAAAATTTTGGTAAATGTTGACAAACCACTTAGCACATTGGCAGAGGATGATAGTATAAGAGATTGTTTTGCAGTATCGTCATGGTACAAAGAAAATCAAATCTTTTGTAAATTGCATGCTCCAAAGCTTGAAATTCTATTGCTAAATACCGTGATTGGGAGAAAAATTGGGACTTTATCACATGAATCATTTGAAGAAACACAAAGGCTTAAGGTGTTTTCTGTAACGAAGAATACAAAATACTATGTTGATCGACCATTATTACAATTCCCTCAAACAATCCATTTGTGGACAAATCTTCGAATTTTGCGCTTGAATGGATGGGAGTTAGGTGACATTGCTTTCATAGCAAGCTTAACAACACTACAGGTTCTTGACTTGCGACAGTGTGAATTTAATGAACTTCCTAATGAAATAGGAAAACTCCAAAGATTGAGACTGTTAGATTTGTCAGAATGTGATATTCTTCGAGAAAATTATAATGGAGCAATAGGAAAATGTTCACAACTAGAAGAATTATACGCTTCTGAATGTGGGCCAGAAAAGTACCTTTGTCAAATTGCTATGGATATTGGTATTCTCCCAAAGCTACAGAGGTTTGTAATACATACTGGCCACATTGATATACCATATTATGCAGAATGCATGAGAGTTTTAGCAGTAACAGGTTTTAATATCTCCGAATTGAGGGCATATAAAAGGAATATTCTACAAACAGCTGAAATTATTGGTTTGAAACGCCTTGCTGGAGGATGTAAAAGTATTATCCCAGACATGGGAGATATGAATGATTTGACTAGTCTCTGTCTTGAATTTTGCAAAAAGATTGAATGCATCTTCGATACAACATCTGATTCAGAGATAGATGATTTGATTCCCAGGTTGGTCGAGTTAAGGTTGTCGGGATTGTACATATTGAAAGAATTGTGTCGAGGTCCACCCATGCAAGTGCTACCCTTTTTTGAGAAATTGAAAAGACTTGAAATATGGAACTGCCCGAAGTTGCACAGCATATTCCCGTCAGAATGTACCTTACAAAATCTTAAGATCCTTGTAATAGACCGTTGCATGTCAGTTCAAGCACTCTTCTCAACACATGTTGCTCAACGTCTGCAGCAACTAGAAGAGCTCACTATAGCATATTGTAAGGAATTGAAACATATAATTGCAAGTGGAAGAGACCAGGGAATAGTTCCAGCTCCAAGGAATTCTCATTTTCTCATGCCTAGTTTGAAGACACTTTGCATTGATTCTTGTTGGAAGTTAGAGTTGGTATTCCCAATCTGTTGTGTTGAAGGACTTGCACAACTGCAACAGATACAGATAAGCGGGGCTCCTAGGCTGAAATATGTATTTGGTGAATGTGATCACGATGATCATTCAGCTCACCAATACCAGAACCACATCATGCTTCCTCATTTGGAAGTTCTCTCACTTGAATCTCTTGAAAATCTTGTTGGAATATGTCCTGAAAACTATCATGCAAAGTGGTCATCTCCAAGGAAGCTAACTATGAAGAATTGTCAAAAATTGGCTACATCATGGATCGCTGTGATGGATGGCTCTTATCAGAGACAACATCATCTGAATGAGAAGTTACCCTCAAAACTGCAAGAACTGTATTTAGACAGTTTACCTCAAATGAACCTCATATCATGGGTAGGTTCTACTCCAAGACAGATTTTAAGTCTCCAATGTCTTCAGCATTTACATGTGAATAAATCTGAAAACTTGAAATCTCTGTTCTCCATGGAAGTACAAAGAACCCTACCAGAGTTGATGTCCCTTACTATATGTGATTGCCAAGAATTGGAACAAATCATTGCAGCAAATAAAGAACTTGTACAACTGCCCAATGCTGAAGTTTATTTTCCAAAGCTAACAGACATAAGGGTCAAAAACTGCAACAAGTTGAAAAGCCTTTTCTCTGTTGCTATGGTTAGAATGCTTCCACAATTGAGCACTCTTCACATATCAAATGCTACTCAACTGGAAGAGATTTTTAGACATGGCAGTGGAGACAGCACTACAAATGAAATGGAAATTATGCTTCCAAACTTGACAAAGATAAAACTATATAAGCTGTCGAGTTTTGTTGATATCTGCCAGGGTTGTAAGTTACGGGCTGTGAAACTTCAAGAACTCGATATAGATGAATGCCCTAAAACTGCTCCAAGTTTGATAGAAATTCAGAAGAAGCAGAGGCCATTAGGAGAAGATGATGAAGGTTCTTTTAAATATTATAGTGAACTGTTTGACATGATGATGTGGAAGAACCAGGCAATATCAATGAGGATGTTCGCAGCCATTCTTCTGCTAATTGAAGACCTAGTTCCTATACTCCCAGTTGTGAGGAATCAAGTGGTACAGAATGAGGTTATGCTAGATGTTGTTACACCTAAGGCTGATGTTGTCACACCTAAGGGAGGAAACAAATCAAGGTCATTCACTGCAAAAGACAATGTATATGTCACAACTGAGACACTATTGGCTACTGGGAAGAATGTTGAAAACTCTCCAAATAAAAGAGGGAGAAAGGCATCCACTGGTGTTAGCACACAAGAATCACTAGTTGATGGTGGCATTTAG 4068 0.3783 MADIVISIVAKVTEYLVKPAISRGRYFLCVSKVIKDLENETKELTFESAGLKDRVELVKERAEVIEKPVEEWLNDVENLLKEVAGLEQSMGANNNCFQGWCPIWRRYCLCEQMVEKIEAMRKFKGKSNIQPFSHPAPLPGIQYGSSENIIYFESTKVAYNELLEALKDDSIYMIGVYGMGGSGKTTLVTEAGKKAEQLNLFDKVILITVSQTPSIRDVQGKIADMLNLKLEEETKEGRAQRIWQSLKEKKRILVIVDDLWRKFNLEDIGICLQNDNKGAWKILITTRNQSVCTSMDCQKKIHLGLLSEDESWSLFQKHANIDDEFSKSLDDVPRKLCNECKGLPIAIVTVGSSLKGKSKDEWEVALNSLRDSEAFNDHEGVRAALCCLKLSYDYLENNEVQLLFLMCSMFPEDYNILIEDLIQLAIGLGVGGRSSLKSMRSWIKAGINKLLDSCLLMSNDYLIIHGQESKEYMKMHDMVREAALWIAKKFENCKILVNVDKPLSTLAEDDSIRDCFAVSSWYKENQIFCKLHAPKLEILLLNTVIGRKIGTLSHESFEETQRLKVFSVTKNTKYYVDRPLLQFPQTIHLWTNLRILRLNGWELGDIAFIASLTTLQVLDLRQCEFNELPNEIGKLQRLRLLDLSECDILRENYNGAIGKCSQLEELYASECGPEKYLCQIAMDIGILPKLQRFVIHTGHIDIPYYAECMRVLAVTGFNISELRAYKRNILQTAEIIGLKRLAGGCKSIIPDMGDMNDLTSLCLEFCKKIECIFDTTSDSEIDDLIPRLVELRLSGLYILKELCRGPPMQVLPFFEKLKRLEIWNCPKLHSIFPSECTLQNLKILVIDRCMSVQALFSTHVAQRLQQLEELTIAYCKELKHIIASGRDQGIVPAPRNSHFLMPSLKTLCIDSCWKLELVFPICCVEGLAQLQQIQISGAPRLKYVFGECDHDDHSAHQYQNHIMLPHLEVLSLESLENLVGICPENYHAKWSSPRKLTMKNCQKLATSWIAVMDGSYQRQHHLNEKLPSKLQELYLDSLPQMNLISWVGSTPRQILSLQCLQHLHVNKSENLKSLFSMEVQRTLPELMSLTICDCQELEQIIAANKELVQLPNAEVYFPKLTDIRVKNCNKLKSLFSVAMVRMLPQLSTLHISNATQLEEIFRHGSGDSTTNEMEIMLPNLTKIKLYKLSSFVDICQGCKLRAVKLQELDIDECPKTAPSLIEIQKKQRPLGEDDEGSFKYYSELFDMMMWKNQAISMRMFAAILLLIEDLVPILPVVRNQVVQNEVMLDVVTPKADVVTPKGGNKSRSFTAKDNVYVTTETLLATGKNVENSPNKRGRKASTGVSTQESLVDGGI 1355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi9g00078 1355 Coils Coil 69 89 - -
Sebi9g00078 1355 Gene3D Ribonuclease Inhibitor 519 958 IPR032675 -
Sebi9g00078 1355 Pfam NB-ARC domain 161 393 IPR002182 GO:0043531
Sebi9g00078 1355 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 407 IPR027417 -
Sebi9g00078 1355 PRINTS Disease resistance protein signature 173 188 - -
Sebi9g00078 1355 PRINTS Disease resistance protein signature 246 260 - -
Sebi9g00078 1355 PRINTS Disease resistance protein signature 340 354 - -
Sebi9g00078 1355 PRINTS Disease resistance protein signature 633 649 - -
Sebi9g00078 1355 FunFam Probable disease resistance protein At1g61300 146 300 - -
Sebi9g00078 1355 Gene3D - 305 391 IPR042197 -
Sebi9g00078 1355 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1022 1215 - -
Sebi9g00078 1355 MobiDBLite consensus disorder prediction 1326 1349 - -
Sebi9g00078 1355 Gene3D Ribonuclease Inhibitor 962 1160 IPR032675 -
Sebi9g00078 1355 SUPERFAMILY L domain-like 474 1161 - -
Sebi9g00078 1355 Gene3D - 392 484 IPR036388 -
Sebi9g00078 1355 MobiDBLite consensus disorder prediction 1326 1355 - -
Sebi9g00078 1355 Gene3D - 144 302 IPR027417 -
Sebi9g00078 1355 Coils Coil 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi9g00078 Sebi-Chr9 1211837 1217417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi9g00078 171 646 WRKY Transcription Factor Family AT5G45050 22.556 1.44e-06 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi9g00078 - - mtr:25488990 1337.01