Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi9g00067 ATGGCAATTTCAAGTAAGCATCTTAGGAGTGAGGAAACTGAGGTTGTTCAGAGGGCTACTTGTTATGATGGTAGTAAGCAAAAGGGTTCTAACTTTATGACTGTGGATTTGTCTGGTTACCCTTTTGGACAAGAGCGTGGCAATCGTGTGGTTCACTTTTACCTAAAGGATTCTGCTGGGGAATCCATCCTTGCAGTTGTGGGCACTGAGAGGAGCGTTAGACACATGTGCTATGTAGTTGCTGAGGAGTTCCTTGAAATTTGTGGGAAGGAGGGTTCCATTCCAACTGGTTTCAAATGGAGATCTAGAAGAGAGGTGGTGGATTGGCTGACATCAATGCTGTCAAAGCAGCATCTGCAGGGAGATAGAAGTGCTCATGAGATCACAAATGGCTCTGTCAATGAAGTTACTGGTCTGTCTGCACAAATAGCTGATGACAAGGACATTCTAAAGAGTAACTCCAAATTATCCAATTCAGAAATTGTTTGGTCAGGAGTTGCGTGGACATGTGGCAAGCAACTCAAGCATTATCCTGCCTTTTGCAGGAATGGCATCAAAATAGCGATTCGATCCTTTGTTTTTGTTATGGGCAAGGGAGAGAAACATTATATTGCTTATTTAGAGGATATGTATGAAGACAGGAGGGGGCAGAAGAAGGTTAAAGTGAGGTGGTTTCACCATAATCAGGAAGTCAAGGGTGCACGAAATCCTCACCCTCGGGAAATTTTTATCACACCATATTCTCAAGTCATTAGTGCAGAGTGTGTAGATGGTCCTGCCACGGTCTTAACTCGTGAACACTATGAAAAATGCATGCCTTCATTTTCCCCCACTTCAACAGACAGAATACATTTGTGCTTTAGGCAATTTAGAGGCAACAAAGTAAAGCCCTTTGACTTGAGTAAACTGCGTGGCTACTATGCTCAACCAGTTCTTTCTTGCTTGCACCTTGATACTATCCAGAACACTGATTCTAAGAGCAACAGCCTCACAGGAGAAGATGAAGATTTGAATATAAGTGATGATACAAAGCTGGGAGCCAAGAGGAGCAGAAGTGATAAGGGGTCTCCTCAATCTCAGATAGGTCGACAGGGAGTTAGGAAGTTAGTTAGAAGTAAGCAAATGATGGTATATGAAACCTTCCAGGTTGTAAATTATGCTAGGCCAGATAGGAGATTGTTTTCTCTAAAGCAGATTGAATGTCAACCTATGTATAACCCCACCTACAAGGTTGATGACAAGATAGAGTTGCTTTGTCAAGATAGTGGCATCAGAGGCTGCTGGTTCAGGTGTACAGTTTTGCAGGTAGCCCGGAAACAACTGAAAGTCCATTATGATGATGTTCAGGATGAAGATGGAAGTGGAAATCTTGAGGAGTGGATCCCTGCTTTCAAGTTGGCCAAGCCTGATAAACTTGGGATGAGGCATTCTGGCCGGCCCACCATCAGGCCAGCTCCAACTTATGAGGAACAAGAGCTGGCCATTGAGGTTGGAACTGCAGTTGATGCATGGTGGAGTGATGGCTGGTGGGAGGGGGTTGTAACTAGAAATGACAACTGCGGTGATGATAGTGTTCAAGTCTACTTTCCTGGTGAAAGCTTGCTAAAGAAAGTGCGCAAGAAGGATTTAAGAATTTCTAGAGATTGGTTAGGGGACAGGTGGATTAATATTAAGTCAAAGCCTGATATAACCTCGACTATATTTACTGATAATAACTTTAACACAAAGCTTTCCATGTCCCCATCTAAGGCTAAAGATGTGGACTCTGTTGGTTTTGCTAATTCATGTCATGACGTTCTTCCCTGTAAGAATTCTAATGAACTTGATGCTGAAGAGAAATTTGTGAGTTTTGATGGTGTTGCTGAAGATGGGGACTGTGTTCATGATAATAAACCCCCTTCAGAAAAAAGAACATCTGGACCGGACTGTAAAGCTGTAGAACTCATGGAAGTGGATGTGTAA 1962 0.4292 MAISSKHLRSEETEVVQRATCYDGSKQKGSNFMTVDLSGYPFGQERGNRVVHFYLKDSAGESILAVVGTERSVRHMCYVVAEEFLEICGKEGSIPTGFKWRSRREVVDWLTSMLSKQHLQGDRSAHEITNGSVNEVTGLSAQIADDKDILKSNSKLSNSEIVWSGVAWTCGKQLKHYPAFCRNGIKIAIRSFVFVMGKGEKHYIAYLEDMYEDRRGQKKVKVRWFHHNQEVKGARNPHPREIFITPYSQVISAECVDGPATVLTREHYEKCMPSFSPTSTDRIHLCFRQFRGNKVKPFDLSKLRGYYAQPVLSCLHLDTIQNTDSKSNSLTGEDEDLNISDDTKLGAKRSRSDKGSPQSQIGRQGVRKLVRSKQMMVYETFQVVNYARPDRRLFSLKQIECQPMYNPTYKVDDKIELLCQDSGIRGCWFRCTVLQVARKQLKVHYDDVQDEDGSGNLEEWIPAFKLAKPDKLGMRHSGRPTIRPAPTYEEQELAIEVGTAVDAWWSDGWWEGVVTRNDNCGDDSVQVYFPGESLLKKVRKKDLRISRDWLGDRWINIKSKPDITSTIFTDNNFNTKLSMSPSKAKDVDSVGFANSCHDVLPCKNSNELDAEEKFVSFDGVAEDGDCVHDNKPPSEKRTSGPDCKAVELMEVDV 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi9g00067 653 MobiDBLite consensus disorder prediction 337 351 - -
Sebi9g00067 653 Gene3D - 153 300 IPR043151 -
Sebi9g00067 653 ProSiteProfiles BAH domain profile. 185 301 IPR001025 GO:0003682
Sebi9g00067 653 Pfam Agenet domain 412 486 IPR008395 -
Sebi9g00067 653 Pfam BAH domain 192 286 IPR001025 GO:0003682
Sebi9g00067 653 MobiDBLite consensus disorder prediction 622 641 - -
Sebi9g00067 653 CDD Tudor_Agenet_FMRP-like_rpt2 497 544 - -
Sebi9g00067 653 CDD Tudor_Agenet_AtDUF_rpt1_3 409 486 - -
Sebi9g00067 653 SMART BAH_4 185 301 IPR001025 GO:0003682
Sebi9g00067 653 SMART agenet_At_2 493 551 IPR014002 -
Sebi9g00067 653 SMART agenet_At_2 407 472 IPR014002 -
Sebi9g00067 653 MobiDBLite consensus disorder prediction 325 364 - -
Sebi9g00067 653 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 408 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi9g00067 Sebi-Chr9 1113350 1117948 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi9g00067 421 549 PHD Transcription Factor Family AT5G58610 31.111 1.11e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi9g00067 - - gsj:114395106 995.727