Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi9g00051 ATGGCCGAAAACATCAAATCAACCCCCGTTTTTCAAGAAATGCGAACCCTCCATTCAGGAAAGCATCCAATAGAAGCTTCCAAGTCAAATATCAAGGCCACCAATGAAGACCCAAGTCAGACCCAAGCACGTGCCAGATACCAAAGTAACGGTCCAGATCAAGGAGCACTCACCAAATCCAAGGGTTCTAAATTCGTCCTTGCAAACTCACACTTATCGACTAGCAACGGTCCAAAACACGCCACGTGTCCACAAGATAAAGTGTTATTAACCCTTCTGATCCAACGGACCTGCTCATTAGCTCCCAAACAAACCCCTTCCGTTCCGTTTCGCCTATCCCTCCTCGCCGGAGCCACCGTCACCCGCCGCCGACGACCCTATCCGACCCTGCAAACACATCCAATTCGAGTTCCACTGAATATTGCTCGATTCATCAATTTCAGGTTTCGAGGAGTTTGTTTCAAGTTTCAACAGCGCTTCAAATTCACGCGGACCACCGAGTCAAAACAATTCGTGACTCGTCCATCGAACTCAAATTCTCATTCATTCTTTTCCCTAATCGAATTCGAAATTCCGAAGAAGTACCACGAGAGCACTGGAATTCAGAGTCCGAGGAGTTTCTTCCTCGAGCACTGCTTCGATTTCACGCGGAATCGAGTCAAAGCGATCCGAGTTGAGTTCCTGACTCACCCGTGGCGGACTCGGATTCCAATTGCACGGTTCAGTGAGTTAGGGATTCCGAGGAGTTTTACCTTTGTCGTTTTGTCTGCAAAACAGCGCTTCAATTTTCACGAGTCGAATCGAACTGTCGGAAGGTCGTCGATGGCGGACTCGGACAACGATTCCGGCGGGGCGCATAACGCCGGCGGAAACGCTCAAGGCAGCGAGTTGTCACCGAGAGAACAGGATCGGTTCCTGCCGATAGCGAACGTGAGCAGGATCATGAAGAAGGCGCTGCCGGCGAACGCGAAGATCTCAAAGGACGCGAAGGAGACGGTGCAGGAGTGCGTGTCGGAGTTCATCAGCTTCATCACCGGCGAAGCCTCCGACAAGTGCCAGCGCGAGAAGCGCAAGACCATCAACGGCGACGACCTGCTGTGGGCCATGACCACGCTTGGCTTCGAGGACTACGTCGAGCCTCTGAAGGTTTACCTTCAGCGCTTCAGGGAGATGGAAGGGGAGAAGAGCGTAGCGGCGCGTGACAAGGACGCTCCTCCTAATGCTAACAGTCCCTTCGAGAGTGGTAGTTATGGTGGTGGAATGATGATGCATCAGGGACACGTATACGGTTCTGGTGGATTCCATCAAGTGGCTGTGACTGGTGGTAGTACCCTTATGGGTAAGGGTGGGCCTGGTTATCCTGGGCCTGGATCTAATGCAGGTAGACCCAGATAG 1395 0.5219 MAENIKSTPVFQEMRTLHSGKHPIEASKSNIKATNEDPSQTQARARYQSNGPDQGALTKSKGSKFVLANSHLSTSNGPKHATCPQDKVLLTLLIQRTCSLAPKQTPSVPFRLSLLAGATVTRRRRPYPTLQTHPIRVPLNIARFINFRFRGVCFKFQQRFKFTRTTESKQFVTRPSNSNSHSFFSLIEFEIPKKYHESTGIQSPRSFFLEHCFDFTRNRVKAIRVEFLTHPWRTRIPIARFSELGIPRSFTFVVLSAKQRFNFHESNRTVGRSSMADSDNDSGGAHNAGGNAQGSELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREMEGEKSVAARDKDAPPNANSPFESGSYGGGMMMHQGHVYGSGGFHQVAVTGGSTLMGKGGPGYPGPGSNAGRPR 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi9g00051 464 MobiDBLite consensus disorder prediction 443 464 - -
Sebi9g00051 464 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 278 401 IPR027113 GO:0001228|GO:0006355|GO:0016602
Sebi9g00051 464 PRINTS CCAAT-binding transcription factor subunit A signature 333 351 - -
Sebi9g00051 464 PRINTS CCAAT-binding transcription factor subunit A signature 371 389 - -
Sebi9g00051 464 PRINTS CCAAT-binding transcription factor subunit A signature 352 370 - -
Sebi9g00051 464 Gene3D Histone, subunit A 294 411 IPR009072 GO:0046982
Sebi9g00051 464 FunFam Nuclear transcription factor Y subunit B-3 294 415 - -
Sebi9g00051 464 MobiDBLite consensus disorder prediction 269 298 - -
Sebi9g00051 464 ProSitePatterns NF-YB/HAP3 subunit signature. 336 352 IPR003956 GO:0005634|GO:0006355|GO:0043565
Sebi9g00051 464 SUPERFAMILY Histone-fold 302 403 IPR009072 GO:0046982
Sebi9g00051 464 MobiDBLite consensus disorder prediction 28 59 - -
Sebi9g00051 464 MobiDBLite consensus disorder prediction 19 59 - -
Sebi9g00051 464 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 305 369 IPR003958 -
Sebi9g00051 464 MobiDBLite consensus disorder prediction 269 299 - -
Sebi9g00051 464 MobiDBLite consensus disorder prediction 396 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi9g00051 Sebi-Chr9 826182 827906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi9g00051 275 429 CCAAT-HAP3 Transcription Factor Family AT4G14540 73.457 3.98e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Sebi9g00051 CBFD_NFYB_HMF 8e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi9g00051 K08065 - gmx:100813580 305.449