Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi9g00029 ATGGTGTCAAAGGTAGCCACACAACTCACTGTGGAAGAAGATAGATACAAGAAAATTTTGAAGGGCATCACAGGAAGCATTGGTCCTGGTGAAATTCTTGCTTTGATGGGTCCTTCTGGCAGTGGGAAGACAACCTTGTTGAGAGTTATAGGAGGAAGATTAGTTGACAATGTAAAGGGAAAAATAACTTATAATGATGTTCGATATACTCCAGCTGTCAAAAGGAGGATTGGATTTGTGACACAAGAGGATGTGCTTTTTCCACAATTAACTGTAGAAGAAACATTAATCTTCTCAGCATTCTTAAGGCTGCCAGCTAATATGAGCAAGCAGCAAAAATATGCAAAAGTGGAGACCACTGTGAAGGAGCTAGGCCTTGAAAGATGTCGCCACACAAAAATAGGTGGAGGATATCTCAAAGGCATATCAGGTGGAGAAAGGAAGAGAACTAGCATAGGCTATGAAATTCTTGTTGATCCTTCACTGCTGCTGCTTGATGAACCAACTTCAGGCCTTGATTCCACCTCAGCAAACAAACTCCTTCTCACTCTTCAGGGACTTGCTAAGGCTGGGAGGACCATAATCACCACAATACACCAGCCATCCAGCAGAATCTTTCACATGTTTGACAAACTACTTCTTATAGCAGAAGGCTATCCTGTTTACTATGGGAAGGCTAGAGAAACAATGGAGTACTTTTCATCTTTGAGGTTCATACCAGAAATACCAATGAATCCTGCAGAGTTCTTGCTTGACTTGGCAACTGGACAAGTGAATCACATAAGTATTCCAACAGATATTTTGGTTGATCAAGAATCTGCTGACTCTTCAAAAGCTGTTATTAAATATCTACAACTCAAGTACAAAGCTTTACTGGAGCCAAAAGAAAAAGAGAACCACGGAGAAGCAAACACACCAGAACATCTTCAACTGGCCATTCAGGTCAAGAAAGAGTGGACATTGAGTTGGTTTGACCAATTTGTGATTCTTTCTAGGAGAACATTCAAAGCAAGATGCAAGGACTATTTTGATAAGTTAAGACTAGTACAAGCACTTGGAATTGCACTTTTGTTGGGGCTCCTTTGGTGGAATTCTTCAACCAATACAGAAGCTCAACTCAGAGACCAGGTTGGTTTAGCATTCTACATCTGTATATTCTGGACATCTACATGCATTTTTGGAGCTGTCTATGTCTTCCCATTTGAAAAGTACTACTTAATAAAGGAAAGGAAAGCTGACATGTATAGATTAAGTGTATACTATGCATGCAGCACTCTATGTGACATGGTGGCACATGTTTTCTATCCTACTTTTTTCATGGTTATCTTGTACTTCATGGCTGGCTTTAAGAGGACTGTTGCTTGCTTCTTCCTGACATTATTTACTGTTCTGCTGATAGCTATAACAAGTCAAGGGGCAGGAGAACTATTTGGAGCTGCAGTTATGAGTATAAAAAGATCAGGAATGGCTGCTTCTTTGATACTAATGTTATTCCTTCTTACAGGTGGCTACTATGTCCAGCATATACCAAAGTTCATGAGGTGGTTGAAGTATTTGTCATTCATGTACTATGGTTTCAGGCTTCTTCTAAAGGTGCAGTATTCAGGAGACCAATTATATGATTGTGAAAGCCAAGGAGGGTGCAGGACACTGCAGAGTTCACCTACATTTGACACTGTAAACTTAAAAGGTGGCTTAGAAGAAGTTTGGGTTATGCTAGCCATGGCTCTATGTTTCCGCTTATTAGCTTACTTTTGCCTCCGTAGAAGAATTGATGTCTCTAATTAA 1788 0.401 MVSKVATQLTVEEDRYKKILKGITGSIGPGEILALMGPSGSGKTTLLRVIGGRLVDNVKGKITYNDVRYTPAVKRRIGFVTQEDVLFPQLTVEETLIFSAFLRLPANMSKQQKYAKVETTVKELGLERCRHTKIGGGYLKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANKLLLTLQGLAKAGRTIITTIHQPSSRIFHMFDKLLLIAEGYPVYYGKARETMEYFSSLRFIPEIPMNPAEFLLDLATGQVNHISIPTDILVDQESADSSKAVIKYLQLKYKALLEPKEKENHGEANTPEHLQLAIQVKKEWTLSWFDQFVILSRRTFKARCKDYFDKLRLVQALGIALLLGLLWWNSSTNTEAQLRDQVGLAFYICIFWTSTCIFGAVYVFPFEKYYLIKERKADMYRLSVYYACSTLCDMVAHVFYPTFFMVILYFMAGFKRTVACFFLTLFTVLLIAITSQGAGELFGAAVMSIKRSGMAASLILMLFLLTGGYYVQHIPKFMRWLKYLSFMYYGFRLLLKVQYSGDQLYDCESQGGCRTLQSSPTFDTVNLKGGLEEVWVMLAMALCFRLLAYFCLRRRIDVSN 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi9g00029 595 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 16 583 - -
Sebi9g00029 595 Pfam ABC transporter 20 170 IPR003439 GO:0005524
Sebi9g00029 595 Gene3D - 5 237 IPR027417 -
Sebi9g00029 595 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 5 242 IPR003439 GO:0005524
Sebi9g00029 595 SMART AAA_5 29 220 IPR003593 GO:0016887
Sebi9g00029 595 CDD ABCG_EPDR 1 224 - -
Sebi9g00029 595 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 235 IPR027417 -
Sebi9g00029 595 Pfam ABC-2 type transporter 199 260 IPR043926 GO:0140359
Sebi9g00029 595 FunFam ABC transporter G family member 22 7 236 - -
Sebi9g00029 595 Pfam ABC-2 type transporter 326 534 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi9g00029 Sebi-Chr9 369313 372158 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi9g00029 18 203 Calmodulin-binding Proteins AT2G36910 31.414 8.39e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi9g00029 K05681 - gmx:100806094 1056.97