Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi99g00052 ATGGCAGAGGACAATGTAGTTCTGTTGGATTTCTGGCCAAGTTCTTATGGAATGAGGGTGAAAATAGCTTTGGCTGAGAAGGGGGTTTCATACGAGTGCAAGCAAGAAACCTTTGAAGCTAAAAGTTCTCTGCTCTTAGAAATGAACCCGGTTCACAAAATGATCCCAGTTTTGATTCATAATGGAAAGTCCATTTGTGAATCACTCAACATTGTTGAGTACATTGATGAGACTTGGAACCACAAACCTTCTCTGCTGCCTTCTGACCCTTACAAACGATCCCAAGCCAGGTTTTGGGGCGATTACATTAACAAAAATGTGTACAGCATTGGAAAGAAGGTATGGACAGGAAAGGGTGAAGAACAAGAAGAGGGCAAGAAGCAATTTATAGAATGCTTGAAGATTCTGGAAGAAGAGCTTGGAGACAAACCATATTTTGGTGGTGAGGACTTTGGGTATGTGGATGTGGCTCTTGTTCCCTTCACCAGCTGGTTTTACACATACGAGACTTGTGGGAAACTAAGCAAAGGGAAAGAGTGCCCCATGCTTGTGGCTTGGGCCAAGAGGTGCATGGGAAAAGAGAGTGTGGCCAAGTCACTCCCTCACCCTCACAAGATCTATGGTTTTGCACTGCAATATAAACAGAGACATGGACTTGAATAG 663 0.4374 MAEDNVVLLDFWPSSYGMRVKIALAEKGVSYECKQETFEAKSSLLLEMNPVHKMIPVLIHNGKSICESLNIVEYIDETWNHKPSLLPSDPYKRSQARFWGDYINKNVYSIGKKVWTGKGEEQEEGKKQFIECLKILEEELGDKPYFGGEDFGYVDVALVPFTSWFYTYETCGKLSKGKECPMLVAWAKRCMGKESVAKSLPHPHKIYGFALQYKQRHGLE 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi99g00052 220 Gene3D - 89 220 - -
Sebi99g00052 220 FunFam Glutathione S-transferase U20 89 220 - -
Sebi99g00052 220 CDD GST_C_Tau 90 213 IPR045074 GO:0004364|GO:0006749
Sebi99g00052 220 Gene3D Glutaredoxin 1 88 - -
Sebi99g00052 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 209 IPR010987 -
Sebi99g00052 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Sebi99g00052 220 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Sebi99g00052 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 207 IPR045073 -
Sebi99g00052 220 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Sebi99g00052 220 SUPERFAMILY GST C-terminal domain-like 77 217 IPR036282 -
Sebi99g00052 220 CDD GST_N_Tau 6 79 - -
Sebi99g00052 220 Pfam Glutathione S-transferase, N-terminal domain 8 77 IPR004045 -
Sebi99g00052 220 Pfam Glutathione S-transferase, C-terminal domain 123 189 - -
Sebi99g00052 220 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Sebi99g00052 220 FunFam Tau class glutathione S-transferase 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi99g00052 Sebi-Chr99 1204944 1205979 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi99g00052 7 217 Glutathione S-transferase Gene Family AT1G78370 58.768 4.82e-96 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi99g00052 K00799 - gmx:100527221 395.586