Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi99g00048 ATGCTAGCAAACAAGCCAACATTCAGATGGATACAAAACCTTATGAATAATCTCAACACTGAAATAGCATGTATCCGCCTGGGAAATGTCCATTTTATCCCTGTGAGTAGCCCTGAAATAGCACGTGATATATTGATAAGAAAGGATGCTGTTTTTGCATCAAGACCCTTGAATTGGTCCAGTGAGTATGTCTCATGTGGATATCTCACCACAGCTCTTGTTCCCTTTGGTGAACAGTGGAAGAAAATGAAGAAACTCATAACCAATGACTTGTTGTCACCTTTGAGGCACCAATGGCTTCATGACAAAAGAGTGGAAGAAGCTAACAACCTTGTGCGTTACGTGTATAACAAATGTAAAAGTGGTGGTGGTCTTGTGAATGTGAAGATTGCTGCACAGCATTACTCAGGGAACGTTATTAGGAGGTTGGTTTTCAATACAAGGTACTTTGGAGAGGGGTGTGAAGATGGAGGACCTGGCTTTGAGGAAGTAGAGCATATGCAAGCACTTTTCAAGGTGTTGAAGTACCTCTTTGCTTTTTCTGTTTCGGATTACATGCCATGTTTGAGGGGATTTGACTTGGATGGTCATGAGAAACACATGAAGGAGGCTGCTGAGATTGTGAGGAAATATCATGATCCCATCATTGAGGATAGAATTGAGCAATGGAAGAATGGGAAAAGGATAAAGGAAGAAGATTTGCTTGATGTTCTCATCTCTCTCAAAGATGCGGACAACAATGCACTCTTGACGGCTGATGAAATTAAATCTCAAATTATGGAAATAATGTTGGCAACCGTGGATAATCCATCAAATGCAATTGAATGGGGACTTTCTGAAATGATAAATCAACCTGAGCTACTTCAAAAGGCCATTAAAGAATTGGACAATGTGGTTGGTAAAGAAAGACAAGTCCAAGAATCAGATTTTCCGAAGCTCAACTATGTGAAGGCTTGTGCAAGAGAAGCTTTTCGCCTTCATCCCATTGTGGATTTTATCATTCCACATGTCTCAGTAGCTGACACAGTTGTTGCCAATTACTTCATCCCAAAGGGTAGCCATGTGTTGCTAAGGAGACAAGGAGTTGGCCAAAACCCAAGGGTTTGGAAAGATCCCTTCAAGTTTAAACCTGAACGTCACCTTAAGAGTGATGGATCTAATTTGGTCTTAACAGAGCCAAGCTTGAAATTGATAACATTTAGCACTGGAAGACGTGGCTGTCCAGGGCTTATGCTTGGAACTGACATGACTGTTATGTTATTCGCTAGGTTGCTGCATGGCTTCACTTGGAGTGTTCCACCCAATCAATGTAGAATTGACCTCTCTGAATCAGAAGGAGATACCTCCAAAGCTAAACCACTTGTGGCATTTGCAAAGCCAAGAGAGGTGGAGGAGGAGGAGAAAAGCAAAGAGGAAGATTCAGATAGAATGCAGAATAGAAAAGGAAGGAAAAGTATTAGGCTCAGCACTGAGTGGGTGCAAGAGAGTTTTACCATAATCATTCGTCATGGCTTGGCAGGGTCTACAACAAAACACGTACCTGCTTGCACGAGCTTTGTCCATGCTCTGTCGAGCTCTATCGTGCCCAGTGGCAGTTTTGATGTCCCTAGCTCTGCAGAATCTGCTGATCCTCTAAATGGCTAG 1644 0.424 MLANKPTFRWIQNLMNNLNTEIACIRLGNVHFIPVSSPEIARDILIRKDAVFASRPLNWSSEYVSCGYLTTALVPFGEQWKKMKKLITNDLLSPLRHQWLHDKRVEEANNLVRYVYNKCKSGGGLVNVKIAAQHYSGNVIRRLVFNTRYFGEGCEDGGPGFEEVEHMQALFKVLKYLFAFSVSDYMPCLRGFDLDGHEKHMKEAAEIVRKYHDPIIEDRIEQWKNGKRIKEEDLLDVLISLKDADNNALLTADEIKSQIMEIMLATVDNPSNAIEWGLSEMINQPELLQKAIKELDNVVGKERQVQESDFPKLNYVKACAREAFRLHPIVDFIIPHVSVADTVVANYFIPKGSHVLLRRQGVGQNPRVWKDPFKFKPERHLKSDGSNLVLTEPSLKLITFSTGRRGCPGLMLGTDMTVMLFARLLHGFTWSVPPNQCRIDLSESEGDTSKAKPLVAFAKPREVEEEEKSKEEDSDRMQNRKGRKSIRLSTEWVQESFTIIIRHGLAGSTTKHVPACTSFVHALSSSIVPSGSFDVPSSAESADPLNG 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi99g00048 547 MobiDBLite consensus disorder prediction 460 484 - -
Sebi99g00048 547 PRINTS E-class P450 group I signature 135 153 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi99g00048 547 PRINTS E-class P450 group I signature 407 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi99g00048 547 PRINTS E-class P450 group I signature 40 61 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi99g00048 547 PRINTS E-class P450 group I signature 317 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi99g00048 547 PRINTS E-class P450 group I signature 358 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi99g00048 547 PRINTS E-class P450 group I signature 274 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi99g00048 547 PRINTS E-class P450 group I signature 254 271 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi99g00048 547 PRINTS E-class P450 group I signature 397 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi99g00048 547 Pfam Cytochrome P450 21 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi99g00048 547 CDD CYP79 20 461 - -
Sebi99g00048 547 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 20 466 - -
Sebi99g00048 547 Gene3D Cytochrome P450 1 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi99g00048 547 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 400 409 IPR017972 GO:0005506|GO:0016705
Sebi99g00048 547 SUPERFAMILY Cytochrome P450 5 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi99g00048 547 FunFam Cytochrome P450 9 1 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi99g00048 Sebi-Chr99 1058334 1062650 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi99g00048 1 461 Cytochrome P450 AT4G39950 54.978 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi99g00048 - - gmx:100809902 667.537