Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sebi99g00011 | ATGAACTCAGAACCAGTCTCGAAGTATTACCAGAAGGCAGAGGAGATACTTAAGTTGCTGAAGCCAATCATTGATGCGATTGTTAATTCAGAGTTAACTACTGATGAAGTGCTTAATAAGATGTTTGAAGAACTTGGCCATGTTATTGATGAATTAAAGGAGCATATTGAGAATTGGCACCCGTTGTCTAGCAAAGTTTACTTTATAATGATATATGAACTTCTTAAAGAGGCAATAAGTGTGCAGTCATTAGATTGCTTGTTGATTCATATAGAAAAGTTTACTGCACAGATATCGATGTTAATCTCATGGATACTTATTGATAGCCAGACATCAGTCCTTCCTAGAAGATTGCTGTTTACTTTGTCTCCGCCTTCGCGAGATGTGATTAGGTTAAAAGTTATGCAAGTTGCACCCTTGATATCTAGGATTCGGACTTCGGGGCTCAATATTTTTCCGCAGCTGAAGGTCTCTCAGCAATGTCCCCATGATGAATTGAGTTCTGAACATTTGGAGCACTGTGTTCAGAAACTTAAGCTTTTGGGACATGAAGAAACCTCATCAGTCATTAAAAAAGCTATTACAGAGCAACTTGAAGGTGTAGGACCCAGTTCTGAGGTCCTGGAAAAAATAGCTGATAGCCTCGGGCTAAGGTCTAATCAGGAGGTTCTGATTGAAGCCGTGGCCCTAGAAAAGTTGAAGGAGAATGCTGAACAAACTGAAAAGACTGCAGAAGTGGAATACATTGATAAAATGATTGCTGTTGTTACACGTATGCATGAGCGTCTTGTTATGCTTAAGCAAGCCCAGAGTTGCAGCCCAGTTCCAGTGCCTGCTGATTTTTGTTGTCCTCTTTCTTTGGAGTTGATGACTGATCCAGTGATTGTGGCCTCAGGGCAAACCTATGAGCGGGCTTTTATCAAGAACTGGATTGATCTTGGGCTTACTGTTTGTCCAAAGACACACCAGACTCTGGCTCACACCAACCTAATACCTAACTACACTGTAAAGGCACTAATTGCAAACTGGTGTGAATCAAACAATGTGAAACTGGCTGATCCTACAAAATCTGCAAATTTAAATCAACCATCTGCTCTTCATGGATATGTGGAGTCTGGTACAACCAGGGAATCCCCTGTTTTTCCTCATTCCAGGAGCAACCAGCCATCCTCACCTGAGTCAGCTCGTTCCCGTTCTTTTAGTTCACCAGAAGGTTCCTTAAGTGGCATGGTTAATGGGCAATATATGGATCTTGCAAGAATGTCACCTGCAGGTTTAGATGACAGGTCTGCTAGCTCAGATGAAAGCAGTATAGATTCAGTTGGTCAACCTTCAATGTCGCCATCTAGAAGGGAATCTTCCAGTGCCTTTAGCTCTGAACAATCTCAAACCCATGTTAGAGCTGTATCTGATTCCAGTGCATTTTCTGGTGCAAATTTTCCCCAAGAAACACAAGGTGATGACAACAGTGCTCCCCAGCTGTCAACTAGTCCAGGCTACAGTAGAGATGCTTCTGGTGAATTAAATCCAGGGCCAGATGCTGCTGGTGCTGCTGCCATGCCATCAATGCATAGAGAACCTGAGTTCCCACCCCGATTGATGGAGGCAAGGTCTCGAAGCCAAGCTATATGGAGGAGGCCATCAGAGAGGCTTGTTCCTAGGATAGTGTCTTCTTCTGCTATTGAAACCAGGGCTGATCTTTCTGGTATTGAATCCCAGGTTCGGAATTTAGTTGAGGGCTTGAAGAGCTGTGATCTTGATACTCAGAGAGAGGCAACAGCAGAACTCCGCCTTCTTGCTAAGCACAATATGGATAATCGAATTGCAATTGCAAATTGTGGAGCCATTAGCTTATTAGTTGACTTACTTCAATCAACTGATGCAAAGATCCAGGAAAATGCTGTTACAGCACTTCTCAATTTATCAATTAATGATAACAATAAAAGTGCAATTGCAAATGCTGGTGCAATTGAACCTCTGATTCATGTGCTTCAGAGTGGGAGCCCAGAAGCCAAGGAGAACTCAGCTGCCACTCTTTTCAGCTTATCAGTGATTGAGGAAAACAAGATTAACATAGGGAGGTCAGGGGCAATTAGACCACTCGTAGATTTATTAGGGAATGGAACCCCAAGAGGGAAGAAAGACGCTGCCACTGCTTTGTTTAATTTATCAATATATCATGAAAACAAGAATCGGATTGTGCAAGCTGGTGCTGTAAAGCACCTTGTGGAGTTAATGGACCCAGCAGCTGGAATGGTTGACAAGGCAGTGGCTGTCTTAGCAAACCTTGCCACAATTCCAGAAGGAAGAAATGCAATTGGTCAGGAAGGTGGGATTCCTGTTCTAGTTGAGGTTGTTGAGTTGGGTTCTGCGAGAGGAAAGGAGAATGCAGCAGCAGCTCTTTTACATCTTTGCTTACAAAGTAACAGATTTTTAAGCATGGTGCTCCAACAAGGAGCTGTCCCACCATTAGTAGCTTTATCTCAGTCAGGCACACCAAGGGCCAAAGAAAAGGCCCAGGCCCTCCTTAATCAATTTAGAAGTCAAAGACACGGGAATGCTGGGAGGGGCTGA | 2574 | 0.4336 | MNSEPVSKYYQKAEEILKLLKPIIDAIVNSELTTDEVLNKMFEELGHVIDELKEHIENWHPLSSKVYFIMIYELLKEAISVQSLDCLLIHIEKFTAQISMLISWILIDSQTSVLPRRLLFTLSPPSRDVIRLKVMQVAPLISRIRTSGLNIFPQLKVSQQCPHDELSSEHLEHCVQKLKLLGHEETSSVIKKAITEQLEGVGPSSEVLEKIADSLGLRSNQEVLIEAVALEKLKENAEQTEKTAEVEYIDKMIAVVTRMHERLVMLKQAQSCSPVPVPADFCCPLSLELMTDPVIVASGQTYERAFIKNWIDLGLTVCPKTHQTLAHTNLIPNYTVKALIANWCESNNVKLADPTKSANLNQPSALHGYVESGTTRESPVFPHSRSNQPSSPESARSRSFSSPEGSLSGMVNGQYMDLARMSPAGLDDRSASSDESSIDSVGQPSMSPSRRESSSAFSSEQSQTHVRAVSDSSAFSGANFPQETQGDDNSAPQLSTSPGYSRDASGELNPGPDAAGAAAMPSMHREPEFPPRLMEARSRSQAIWRRPSERLVPRIVSSSAIETRADLSGIESQVRNLVEGLKSCDLDTQREATAELRLLAKHNMDNRIAIANCGAISLLVDLLQSTDAKIQENAVTALLNLSINDNNKSAIANAGAIEPLIHVLQSGSPEAKENSAATLFSLSVIEENKINIGRSGAIRPLVDLLGNGTPRGKKDAATALFNLSIYHENKNRIVQAGAVKHLVELMDPAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPVLVEVVELGSARGKENAAAALLHLCLQSNRFLSMVLQQGAVPPLVALSQSGTPRAKEKAQALLNQFRSQRHGNAGRG | 857 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sebi99g00011 | 857 | SMART | arm_5 | 766 | 806 | IPR000225 | GO:0005515 | |
| Sebi99g00011 | 857 | SMART | arm_5 | 644 | 684 | IPR000225 | GO:0005515 | |
| Sebi99g00011 | 857 | SMART | arm_5 | 685 | 725 | IPR000225 | GO:0005515 | |
| Sebi99g00011 | 857 | SMART | arm_5 | 726 | 765 | IPR000225 | GO:0005515 | |
| Sebi99g00011 | 857 | SMART | arm_5 | 603 | 643 | IPR000225 | GO:0005515 | |
| Sebi99g00011 | 857 | SMART | arm_5 | 557 | 601 | IPR000225 | GO:0005515 | |
| Sebi99g00011 | 857 | MobiDBLite | consensus disorder prediction | 429 | 503 | - | - | |
| Sebi99g00011 | 857 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 276 | 351 | IPR013083 | - | |
| Sebi99g00011 | 857 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 737 | 778 | IPR000225 | GO:0005515 | |
| Sebi99g00011 | 857 | FunFam | RING-type E3 ubiquitin transferase | 557 | 852 | - | - |
Showing 1 to 10 of 29 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sebi99g00011 | - | - | tpra:123913325 | 1224.15 |
Showing 1 to 1 of 1 entries