Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi99g00010 ATGTCCAAAGGTTTTGACATTGTCAAATCTGTTGTCAAATCTGCTATAGCCAAAGAACGTCGAATAGGAGCATCTATTGTTCGCCTCTTCTTCCATGACTGCTTTGTTGATGGTTGTGATGGATCATTACTACTTGATGACACTTCATCGTTCAGAGGAGAGAAAACTGCACGTCCCAACAACAATTCTCTGAGAGGTTTTGAAGTAATTGATGCTATCAAGTCTAAGGTGGAGGCAGCATGCCCTGGTGTGGTGTCATGTGCTGATATCTTGACCATTTCTTCTCGTGACTCTGTTCTCATTGTAAAATTTGGAAGAAGGGATTCTAGGACAGCCAATTTCACTGCAGCTAACAATGGTGTGATTCCAGCTCCCACTTCTAACCTCAGCAACCTTATCTCAACGTTTCAAGCTCAAGGGCTTTCTGCCAAGGACATGGTTGCCTTATCTGGAGCTCACACAATAGGGAAAGCAAGGTGTACTACTTTCAGAGATCACATATACAATGACAGCAACATTGACAGATCATTTGCTAAGACTAGGCAGAGGAATTGTCCAAGGACTAGTGGCTCAGGAGACAACAATCTTGCAGTTCTAGACTTCAGAACTTCTACTCATTTTGACAATAATTACTATAAGAACCTCATCATCAAAAGGGGACTACTTCATTCTGATCAGCAGTTGTTCAATGGTGGATCTACTGATTCACTTGTTAGAACTTATAGCCAGAATAGTAAGGCCTTTGATTCTGACTTTGTTACTGCAATGATTAAGATGGGAAACATCAAACCCTTAACTGGGTCCAAAGGGGAGATTAGGAAGAACTGCAGGAGAGTGAATTAA 843 0.4152 MSKGFDIVKSVVKSAIAKERRIGASIVRLFFHDCFVDGCDGSLLLDDTSSFRGEKTARPNNNSLRGFEVIDAIKSKVEAACPGVVSCADILTISSRDSVLIVKFGRRDSRTANFTAANNGVIPAPTSNLSNLISTFQAQGLSAKDMVALSGAHTIGKARCTTFRDHIYNDSNIDRSFAKTRQRNCPRTSGSGDNNLAVLDFRTSTHFDNNYYKNLIIKRGLLHSDQQLFNGGSTDSLVRTYSQNSKAFDSDFVTAMIKMGNIKPLTGSKGEIRKNCRRVN 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi99g00010 280 ProSitePatterns Peroxidases proximal heme-ligand signature. 145 155 IPR019793 -
Sebi99g00010 280 Gene3D - 6 277 - -
Sebi99g00010 280 CDD secretory_peroxidase 6 279 IPR033905 GO:0004601|GO:0042744
Sebi99g00010 280 PANTHER PEROXIDASE 72-RELATED 5 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00010 280 PRINTS Haem peroxidase superfamily signature 145 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi99g00010 280 PRINTS Haem peroxidase superfamily signature 85 102 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi99g00010 280 PRINTS Haem peroxidase superfamily signature 23 37 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi99g00010 280 PRINTS Haem peroxidase superfamily signature 200 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi99g00010 280 Gene3D Peroxidase, domain 2 123 259 - -
Sebi99g00010 280 PRINTS Plant peroxidase signature 25 45 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00010 280 PRINTS Plant peroxidase signature 65 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00010 280 PRINTS Plant peroxidase signature 214 231 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00010 280 PRINTS Plant peroxidase signature 254 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00010 280 PRINTS Plant peroxidase signature 1 20 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00010 280 PRINTS Plant peroxidase signature 84 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00010 280 PRINTS Plant peroxidase signature 144 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00010 280 PRINTS Plant peroxidase signature 198 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00010 280 Pfam Peroxidase 8 244 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi99g00010 280 ProSiteProfiles Plant heme peroxidase family profile. 6 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi99g00010 280 SUPERFAMILY Heme-dependent peroxidases 5 280 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi99g00010 280 ProSitePatterns Peroxidases active site signature. 23 34 IPR019794 GO:0004601
Sebi99g00010 280 FunFam Peroxidase 123 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi99g00010 Sebi-Chr99 187254 189822 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi99g00010 8 280 Peroxidase AT5G05340 68.571 1.29e-137 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi99g00010 K00430 - gmx:100813250 447.588