Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi99g00005 ATGGCTTCTCATCTTCAATATTTACTTGTGCTTGCAATGTTTGCAATTTTAACAATCCCTTCACATTCACATCTTACTCCTGATTATTACGAGAAAGTATGCCCTCAGGCATTGCCAATCATTAAGTCAGTTGTTCATCGTGCACTTATCCGTCAACCACGCATGGGAGCATCTTTACTTCGTCTGCACTTCCATGACTGTTTTGTCAATGGCTGTGATGGATCAGTTCTGCTGGATGACACCCCAAATTTCATCGGTGAGAAGAACTCCATCCCAAATATGGGTTCACTTCAAGGTTTTGAGGTCATTGATGAAATTAAAGCAGCAGTTGACAAAGCTTGCAAACGCCCTGACCCTGTGGTCTCATGTGCTGATATCTTAGCTGTAGCTGCTCGTGATTCTGTCTCCATTTTGGGAGGTCAACTCTATTGGTACAGAGTGTCACTAGGCAGAAGAGATGCAACAACAGCTAGCAGAGATGCTGCAAACACCAATCTTCCACCTCCATTTTTCAGCTTCTCACAGCTTCTTTTCAATTTTCAGTCTCATGGTTTGGACCTTAAAGATCTCGTAGCTCTCTCAGGTGCCCACACCATTGGATTTGCGGCGTGCTCTACCTTTAAGAACAGGATCTACAATGACACAAACATAGACCCCAAATTTGCATCTTCTTTACAGGGGACATGTCCTAAAATTGGTGGAGATAACAATGATGTAGCATTGGATAGTGCCTCTCCCACAAGATTTGACACTTCATACTACACTGCTTTGCTTAGTAAAAGGGGTCTTCTTCATTCTGATCAAGAGCTCTTCAAGGGTGATGGTAGTGAGAGTGACTCATTGGTGAAGCTCTATAGCAGGAACCCCTCTGCTTTTGCTAGAGATTTTAAAGCTTCCATGATTAAGATGGGTAACATGAAGCCTCTTATTGGGAATGCTGGGGAGGTCAGAATCAATTGTAGAAAAGTCAACTAA 975 0.4287 MASHLQYLLVLAMFAILTIPSHSHLTPDYYEKVCPQALPIIKSVVHRALIRQPRMGASLLRLHFHDCFVNGCDGSVLLDDTPNFIGEKNSIPNMGSLQGFEVIDEIKAAVDKACKRPDPVVSCADILAVAARDSVSILGGQLYWYRVSLGRRDATTASRDAANTNLPPPFFSFSQLLFNFQSHGLDLKDLVALSGAHTIGFAACSTFKNRIYNDTNIDPKFASSLQGTCPKIGGDNNDVALDSASPTRFDTSYYTALLSKRGLLHSDQELFKGDGSESDSLVKLYSRNPSAFARDFKASMIKMGNMKPLIGNAGEVRINCRKVN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi99g00005 324 PANTHER PEROXIDASE 72-RELATED 22 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00005 324 CDD secretory_peroxidase 24 323 IPR033905 GO:0004601|GO:0042744
Sebi99g00005 324 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00005 324 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00005 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00005 324 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00005 324 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00005 324 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00005 324 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00005 324 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00005 324 SUPERFAMILY Heme-dependent peroxidases 25 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi99g00005 324 Gene3D Peroxidase, domain 2 167 303 - -
Sebi99g00005 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Sebi99g00005 324 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi99g00005 324 Gene3D - 28 321 - -
Sebi99g00005 324 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi99g00005 324 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi99g00005 324 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi99g00005 324 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi99g00005 324 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi99g00005 324 FunFam Peroxidase 167 303 - -
Sebi99g00005 324 Pfam Peroxidase 42 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi99g00005 324 FunFam Peroxidase 28 170 - -
Sebi99g00005 324 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi99g00005 Sebi-Chr99 102163 103782 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi99g00005 22 324 Peroxidase AT5G05340 53.443 3.72e-113 329