Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi99g00004 ATGGGCTGTGATGGATCAGTTCTACTAAACGACACCCCAAACTTCATTGGTGAAAAGACCGCCTTCCCAAATATTGGTTCAATTAGAGGTTTTGAGGTAGTTGATGAAATTAAAGCAGCAGTAGACAAGGCTTGCAAACGCCCTGTGGTGTCATGTGCTGATATCTTAGCTATAGCTGCTCGTGATTCTGTCTCCATTTTGGGAGGTCCTCACTATTGGTACAGAGTGTTACTAGGCAGAAGAGATGCTAGAAATGCTAGCAGAGATGCTGCAAACACCAATCTTCCACCCCCATTTTTCAGCTTCTCACAGCTTCTTTCTAATTTTCAGTCTCATGGTTTGGACCTTAAAGACCTCATAGCCCTGTCTGGTGCTCACACCATTGGGTTTGCACAGTGCTCTGCTTTTAGGAACAGGATCTACAATGACACCAACATAGACCCCAACTTTGCATCCACTTTGCAGAGGACATGCCATAAAAATGGTGGAGATAACAAATTAGCATCATTGGATGCCACTCCAACAAGATTTGACACTGCATATTATACTGCTTTGATGAATAAAAAGGGTCTCCTTCATTCTGATCAAGAGCTCTTCAAGGGAGATTGTAGTGAAAGTGACTCATTGGTGAAGCTCTACAGCAAGAACCCCTTTGCTTTTGCTAGAGACTTCAAAGCTTCTATGATCAAGATGGGTAACATTAATGTAGTATCCAGCCATTCACAAAAGGACAGAAAACATGTTGGAAAAGAAACCATGCTTATCATGTAA 771 0.4215 MGCDGSVLLNDTPNFIGEKTAFPNIGSIRGFEVVDEIKAAVDKACKRPVVSCADILAIAARDSVSILGGPHYWYRVLLGRRDARNASRDAANTNLPPPFFSFSQLLSNFQSHGLDLKDLIALSGAHTIGFAQCSAFRNRIYNDTNIDPNFASTLQRTCHKNGGDNKLASLDATPTRFDTAYYTALMNKKGLLHSDQELFKGDCSESDSLVKLYSKNPFAFARDFKASMIKMGNINVVSSHSQKDRKHVGKETMLIM 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi99g00004 256 PRINTS Haem peroxidase superfamily signature 50 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi99g00004 256 PRINTS Haem peroxidase superfamily signature 170 185 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi99g00004 256 PRINTS Haem peroxidase superfamily signature 70 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi99g00004 256 PRINTS Haem peroxidase superfamily signature 118 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi99g00004 256 PRINTS Plant peroxidase signature 168 183 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00004 256 PRINTS Plant peroxidase signature 49 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00004 256 PRINTS Plant peroxidase signature 117 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00004 256 PRINTS Plant peroxidase signature 184 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00004 256 PRINTS Plant peroxidase signature 226 239 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00004 256 PRINTS Plant peroxidase signature 29 42 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00004 256 ProSitePatterns Peroxidases proximal heme-ligand signature. 118 128 IPR019793 -
Sebi99g00004 256 PANTHER PEROXIDASE 72-RELATED 2 245 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi99g00004 256 CDD secretory_peroxidase 2 236 IPR033905 GO:0004601|GO:0042744
Sebi99g00004 256 Pfam Peroxidase 2 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi99g00004 256 Gene3D Peroxidase, domain 2 96 231 - -
Sebi99g00004 256 ProSiteProfiles Plant heme peroxidase family profile. 1 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi99g00004 256 FunFam Peroxidase 96 231 - -
Sebi99g00004 256 SUPERFAMILY Heme-dependent peroxidases 2 242 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi99g00004 256 Gene3D - 2 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi99g00004 Sebi-Chr99 70848 71814 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi99g00004 2 250 Peroxidase AT5G05340 55.952 6.52e-90 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi99g00004 K00430 - gmx:100816580 375.17