Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi99g00003 ATGTCTTCTAATGTTCTTCAATGGCTAAGCCTTGTAGGCATCATTTGGCTCCAAGCCATAAGTGGCACAAACACCAATTTCCCTGCTTACTCTTCCCAGTTGAAGCAGCTTCTTTCCATTTCCCAAGTGCAGCTCAATAATCTTGCTTTTGCCTCTGATGCAGGGAAACTTTTTGGCTGGTTTTCAGGCCTTGCTTCTGTCTACCTCCCCCTTTGGCTTGTCCTCATAATCGGTTCATTTCTTGGGTTAATCGGTTATGGTGTGCAATATCTCTTCATAACTAATCAAATTGCCTCTCTTTCCTATTGGCATGTCTTCTTACTAACTTTTCTGGCTGGCAATAGCATTTGTTGGATTAACACAGTTTGCTATGTTGTCACTATAAGGAACTTTATATCTGATCGCCAAGTTGCTGTGGGAATAACAACCAGTTACCAAGGTTTAAGTGCAAAGATTTATACCAATATTGTTGATGCTGTTTCTCCTCACAAGAAAGCTAGAACCTTTCTCTTCCTGAACTCTCTCTTACCAGTGGTAGTTTGCCTAATAGCAACTCCTCTAGTAAGAGAAATTGAAGTCAAAAGTCCTAACCACATGAATGTTGGGTTTGCTGTGATGTTTGTTATTACAATTGCAACTGGAATATATGCTGTGATGAGCAGCTTGCAATTTGTCACAAGCAAAACATCCTCAATGGGTATCCTGATTGGTATTCTAGTGTCCCTTCTCTTGCCTCTGTTAGTTCCAGTTTCAGTGAAGATCAAGGAACTAGCAGGGTCATGGCATAAAAAGAGAGAGAGACTAAGAGTCTACCATTTTACTATGGAGGAGAATACTAATGAAGAGAGGGCAGAGAATGAGGTGAAAGAGGATGAAGATAGCATAGAAGTTCAAGAGGATGGTGCTATGGAAGAAATTGGAGTGAAGTTAATGCTAAGAAGAACAAATTTCTGGTTATATTTCTTTGTTTACTTTTTTGGTGCCACAATTGGTTTAGTATTTCTTAACAACTTGGGACAAATAGCTGAATCCAGGGGTTGCTCTGGTACTTCATCTTTGGTGTCTTTGTCTTCATCTTTTGGGTTCTTTGGTCGTCTCATTCCATCTCTTATGGACTACTTTTACAGGGGAAATGGTGCAATTTCAAGACCTGCTTCAATTGTGGCATTGATGGCTCCAACATCAGGTGCATTTTTCTTACTTCTTAACAAAACTGATTATGCCCTCTACATCAGCACTGTAGTGATTGGAGTGTGTACTGGAGCAATCAGTTCTACTGCTGTTTCCACAACAACTGAGCTATTTGGCACCAAGAATTTCTCTGTAAACCATAATGTGGTTGTGGCCAACATTCCAATGGGGTCCTTTCTGTTTGGCTACTCGGCTGCACTTATTTACCATAAGGAAGGGGGGCATGAACATGGGAAATGCATGGGCATGGAATGCTACAGAAACACTTTTATCATTTGGGGTTCCTTTTGTTTCCTTGGTACTTTCTTGGCTTTGATTCTGTATACAAGGACTAGAAAGTTTTACTCACTTAAACAATAG 1551 0.4036 MSSNVLQWLSLVGIIWLQAISGTNTNFPAYSSQLKQLLSISQVQLNNLAFASDAGKLFGWFSGLASVYLPLWLVLIIGSFLGLIGYGVQYLFITNQIASLSYWHVFLLTFLAGNSICWINTVCYVVTIRNFISDRQVAVGITTSYQGLSAKIYTNIVDAVSPHKKARTFLFLNSLLPVVVCLIATPLVREIEVKSPNHMNVGFAVMFVITIATGIYAVMSSLQFVTSKTSSMGILIGILVSLLLPLLVPVSVKIKELAGSWHKKRERLRVYHFTMEENTNEERAENEVKEDEDSIEVQEDGAMEEIGVKLMLRRTNFWLYFFVYFFGATIGLVFLNNLGQIAESRGCSGTSSLVSLSSSFGFFGRLIPSLMDYFYRGNGAISRPASIVALMAPTSGAFFLLLNKTDYALYISTVVIGVCTGAISSTAVSTTTELFGTKNFSVNHNVVVANIPMGSFLFGYSAALIYHKEGGHEHGKCMGMECYRNTFIIWGSFCFLGTFLALILYTRTRKFYSLKQ 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi99g00003 516 CDD MFS_Mch1p_like 6 498 - -
Sebi99g00003 516 Pfam Nodulin-like 7 250 IPR010658 -
Sebi99g00003 516 SUPERFAMILY MFS general substrate transporter 8 510 IPR036259 -
Sebi99g00003 516 Gene3D MFS general substrate transporter like domains 201 509 IPR036259 -
Sebi99g00003 516 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi99g00003 Sebi-Chr99 65991 67541 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi99g00003 1 515 Nodulin-like Gene Family AT2G30300 48.859 1.69e-150 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi99g00003 - - gmx:100793370 787.719