Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi999g00008 ATGGAAGAAACCAAGGCACAGTTTCTTTCATCTCCTTCCCTCACCTCTCAATCCACTATGGAACTTGGAATTCAGAATAATTTCGGAAGGAGATGCAAGATCAGGGCACCGTGTTGTGATGAGGTTTTTGACTGTAGGCATTGCCATAACGAAGCTAAGAACTCTGAGGAGATTAATCCTCAGGATCGGCATGATATCCCACGCCATGAAATTAACAAGGTCATTTGCTCCTTATGTGACACAGAGCAAGATGTTCAACAGCACTGCATAAACTGTGGAGTATGCATGGGTAATTACTTTTGTGCTACATGCAAATTCTTTGATGATGATATTTCAAAGAACCAATACCACTGTGATGAATGTGGCATCTGCAG 374 0.4198 MEETKAQFLSSPSLTSQSTMELGIQNNFGRRCKIRAPCCDEVFDCRHCHNEAKNSEEINPQDRHDIPRHEINKVICSLCDTEQDVQQHCINCGVCMGNYFCATCKFFDDDISKNQYHCDECGIC 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi999g00008 124 Pfam CHY zinc finger 30 106 IPR008913 GO:0008270
Sebi999g00008 124 SUPERFAMILY CHY zinc finger-like 29 96 IPR037274 GO:0008270
Sebi999g00008 124 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 21 124 - -
Sebi999g00008 124 ProSiteProfiles Zinc finger CHY-type profile. 18 94 IPR008913 GO:0008270
Sebi999g00008 124 SUPERFAMILY Zinc hairpin stack 97 124 IPR037275 -
Sebi999g00008 124 ProSiteProfiles Zinc finger CTCHY-type profile. 96 124 IPR017921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi999g00008 Sebi-Chr999 123782 124790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi999g00008 27 124 C2H2 Transcription Factor Family AT3G18290 32.673 5.63e-13 62.4