Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi999g00003 ATGCTTGACGAACGTTCTACTAGCCTTCGCGCTAAAGTGATTCCCAAGCCAAAGGCATACTATCGATATGCTGAAACAATCAATCCTGATGTCTGGTTTGAAGCTAGTGAGGTGTGGGAGGTGAAAGCTGCAGACTTGACCATTAGCCCCGTTCACCGTGCTGCAGTGGGCATTGTAGATTCAGATAAGGGCATATCTCTTCGATTTCCACGTCTAGTTCGAGTTCGGCCTGACAAAGCTCCTGAACAGGCCTCATCATCTGAGCAGGTTGCTGAAATGTATAATGCTCAAAAACACAATCACACAAACAACCAAGATGACAATGATGATGATTGA 336 0.4554 MLDERSTSLRAKVIPKPKAYYRYAETINPDVWFEASEVWEVKAADLTISPVHRAAVGIVDSDKGISLRFPRLVRVRPDKAPEQASSSEQVAEMYNAQKHNHTNNQDDNDDD 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi999g00003 111 PANTHER DNA LIGASE 1/3 FAMILY MEMBER 2 111 - -
Sebi999g00003 111 SUPERFAMILY Nucleic acid-binding proteins 2 97 IPR012340 -
Sebi999g00003 111 MobiDBLite consensus disorder prediction 77 111 - -
Sebi999g00003 111 Gene3D - 1 98 IPR012340 -
Sebi999g00003 111 Pfam ATP dependent DNA ligase C terminal region 7 79 IPR012309 GO:0003910|GO:0006281|GO:0006310
Sebi999g00003 111 MobiDBLite consensus disorder prediction 82 101 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi999g00003 1 111 Core DNA Replication Machinery Family AT1G08130 72.973 1.38e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi999g00003 K10747 - gmx:100783155 190.66