Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi998g00010 ATGGCTGTGAACTCCAAGAAGCTGCTGATCATTATGCTACTACTTGTTGTGCTCCTCCTCTTCTCAGCAACAGCAGCTCAACCCATGACGTCACTACCAAACTGTCCAACAAATTGTGGCTCCGTCACTATTCCCTTCCCATTTGGCATCACGGAGGATTGTTCCATTGATAACACGTTTCTCATAAGTTGCAACCAAACCTCTTCACCACACAGTCACACAAACAGTACTCCTTTCTTGCCACGAACCAATCTAAGTGTCCTAAACATCTCACCCAACGGCCAACTGCACGTTGCATGGCCAGTAGCCAACGACTGCTACACTGATAAAGGCGAACTCGCGAATCAAACATACTGGGAATTCTACCTGGATCAGTATAATTTGGTCGTCTCAAGTCGAAACGAGTTTATGGTGATTGGCTGCAACACCGTTGGACTAGTGTTGGGAACCGATTTTGAGGGAAAGAACTACACATCGGGATGCGTGTCTCTCTGCAGCAACGGGGCGCGGCTTGCTGATATCGGGGCAAATGGGTCTTGCTCCGGTAATGGTTGTTGCGAGACTTCATCAATACCCAAAGGGCTATCGTATATAGGATATATTTCTGGTATTGCGTTCAACATCACCAACTTCACACGGCCTGACTTCAATCCATGCGGTCAGGCTTTTCTTGTGGAGGATGGAGCCTACAACTTTGTTTCCAAAGACCTCGTTAAGTTGGAGCAGAGAGCGTTTCCTGTGGTGCTGGATTGGGCAGTGGGGAACAAAACGTGCCAAGAAGCTCACAAAGAGGTTTCAAGTTATGCCTGTAAGGCAGACAACAGTCAATGTCACGATGCAACCGACAGACGTGGTTACCTACCTCATGGTTGCCAAGGTGTGAGTGTATGCATCATAGGACTACTCTTGGGAAGCTTTTATATGTATTGGGCATTGAAGAAAAGAAAGCTCATCAAACTTAAAGAACAATTTTTCAAACAAAATGGTGGCCTATTGTTACAACAACAGATAGCCAGGCACAGAGGGTCAGCTGAAATGACTAAAGTCTTCAGTAAGACGGAGCTAGAAGAGGCTACCAACAACTTTGATAAAGACAAGATTCTAGGCCAAGGTGGACAGGGAACTGTTTATAGAGGACTATTACCAGAAAACAGAACTGTAGCAATAAAAAAGTCCAAATTCAATGATCCAAACCAAATTGAGCAGTTCATCAATGAGGTCATCGTGCTTTCACAAATCAACCATAGGAATGTGGTAAAGCTCTTAGGTTGTTGTTTAGAGACCGAAGTTCCCTTACTTGTTTATGAGTTCATTCCCAATGGTACTGTTTATGAGCATCTTCATGATCAAAGCCAAGTTTTAAAACTTACATGGAAAACAAGATTGAGAATAGCAGTAGAAACTGCTGGAGCCTTGGCATACTTGCATTCTGCCACTTCTACACCAATCATTCACAGAGATGTGAAAACTGCAAATATACTCCTTAACCATAATCTCACTACAAAGGTTTCTGATTTTGGAGCTTCTAGAATTATTCCTCTTGATCAAAGTCAGTTAACCACTTTAGTGCAGGGAACATTGGGATATCTTGATCCAGAATACTTCTACACAAGCCAATTAACAGAGAAGAGTGATGTCTATAGCTTTGGGGTTGTCTTAGCAGAGTTATTGACCGGAAAGAAGGCACTCTCTTTTGAAAGGCCAGAGGTTGATAGAAACCTTGCAGTGTACTTCGTTTCTAAAATGAAAGAGGGTCATTTACTTCACATAGTGGATAGCCACATAATTGATGGGACAAATGTTGAGCAACTAACTGAGGTTGCTAATATTGCAAGAAGGTGTTTAAAGGTGAATGGAGAGGAAAGACCCACCATGAAAGAAGTGACAATGGAAATTGAGAGAATAATAGTTATGGAAAAGCATCCATGGGGAAGTGTCCCTTTGTCTTCAGATGAGACTAAAAACTTTCTCAAAGCTGCACCATCTGTTTTCAATGTTGAAGATGGTGTTAGTGGAAGTGGCATTATTAGTACTTCTGGCTTTGATAGCATGAACCGTATTTCGATGTCATTAGGTGGTGGAAGATGA 2088 0.4267 MAVNSKKLLIIMLLLVVLLLFSATAAQPMTSLPNCPTNCGSVTIPFPFGITEDCSIDNTFLISCNQTSSPHSHTNSTPFLPRTNLSVLNISPNGQLHVAWPVANDCYTDKGELANQTYWEFYLDQYNLVVSSRNEFMVIGCNTVGLVLGTDFEGKNYTSGCVSLCSNGARLADIGANGSCSGNGCCETSSIPKGLSYIGYISGIAFNITNFTRPDFNPCGQAFLVEDGAYNFVSKDLVKLEQRAFPVVLDWAVGNKTCQEAHKEVSSYACKADNSQCHDATDRRGYLPHGCQGVSVCIIGLLLGSFYMYWALKKRKLIKLKEQFFKQNGGLLLQQQIARHRGSAEMTKVFSKTELEEATNNFDKDKILGQGGQGTVYRGLLPENRTVAIKKSKFNDPNQIEQFINEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTVYEHLHDQSQVLKLTWKTRLRIAVETAGALAYLHSATSTPIIHRDVKTANILLNHNLTTKVSDFGASRIIPLDQSQLTTLVQGTLGYLDPEYFYTSQLTEKSDVYSFGVVLAELLTGKKALSFERPEVDRNLAVYFVSKMKEGHLLHIVDSHIIDGTNVEQLTEVANIARRCLKVNGEERPTMKEVTMEIERIIVMEKHPWGSVPLSSDETKNFLKAAPSVFNVEDGVSGSGIISTSGFDSMNRISMSLGGGR 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi998g00010 695 ProSiteProfiles Protein kinase domain profile. 362 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi998g00010 695 Gene3D Phosphorylase Kinase; domain 1 336 437 - -
Sebi998g00010 695 SUPERFAMILY Protein kinase-like (PK-like) 346 630 IPR011009 -
Sebi998g00010 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Sebi998g00010 695 SMART serkin_6 362 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi998g00010 695 Gene3D Transferase(Phosphotransferase) domain 1 438 643 - -
Sebi998g00010 695 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 635 IPR045274 GO:0007166
Sebi998g00010 695 CDD STKc_IRAK 368 635 - -
Sebi998g00010 695 Pfam Protein tyrosine and serine/threonine kinase 365 631 IPR001245 GO:0004672|GO:0006468
Sebi998g00010 695 FunFam Wall-associated receptor kinase 2 332 437 - -
Sebi998g00010 695 Pfam Wall-associated receptor kinase galacturonan-binding 35 95 IPR025287 GO:0030247
Sebi998g00010 695 FunFam Wall-associated receptor kinase 2 438 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi998g00010 Sebi-Chr998 131898 137154 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi998g00010 9 688 Receptor kinase-like Gene Family AT1G21230 42.252 2.25e-176 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Sebi998g00010 PK_Tyr_Ser-Thr 3.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi998g00010 - - gmx:100798027 862.448