Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi997g00007 ATGGCGAGAACCCCTTCCTGTGACAAAAGTGGATTGAGGAAAGGTACTTGGACTGCTGAGGAAGATCGTAAGTTAATTGCTTATGTCACTCGATATGGCTGCTGGAATTGGCGCCAACTCCCCAGATTTGCAGGTCTGCAAAGATGTGGGAAGAGTTGCAGATTGAGATGGTTGAATTATCTTAGGCCTAATATCAAAATGAGGAATGCATCATCATCAGAATGCACAAAAAGCTGGGCAATAGATAATGAAGTAAAGAACCATTGGCATACCACACTCAAGAAGAGAGTTGCAAATGAGAAAGCCAACAAATCCTCCAAATCAAAAGATATTGAATCCACTCAAGGGAGGGACTCAATGACCAACAATGATGCTGTTCCTGTTTTTCAAGTTACTCTTCCAACTACTTCCTATATGTCAGAAATTACTGGTCCATTATCCCCATTTTCATCCTCCAGCGAGTTTTCTTCCGTAACTTCAGATCACACTTCTGCTGCCAGTAATGGAAATTTGTTGCTTGAAGATGATGACTTCAGTTTTCTGGATGCATATGCAGAGACTGTGGATATTGAAACTTTCTGGACAGAGTCATTACTAGCTGATATTTCATCCTCTACACCAAGTGAAACAGTGCTAGACTATACTAATTGTGCTTTTCAAAATCAAGATGATACCCAGAATAACCTTGATGGTGTCATGACTACTTTTGGGTAG 714 0.4062 MARTPSCDKSGLRKGTWTAEEDRKLIAYVTRYGCWNWRQLPRFAGLQRCGKSCRLRWLNYLRPNIKMRNASSSECTKSWAIDNEVKNHWHTTLKKRVANEKANKSSKSKDIESTQGRDSMTNNDAVPVFQVTLPTTSYMSEITGPLSPFSSSSEFSSVTSDHTSAASNGNLLLEDDDFSFLDAYAETVDIETFWTESLLADISSSTPSETVLDYTNCAFQNQDDTQNNLDGVMTTFG 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi997g00007 237 MobiDBLite consensus disorder prediction 96 125 - -
Sebi997g00007 237 MobiDBLite consensus disorder prediction 96 114 - -
Sebi997g00007 237 SMART sant 13 63 IPR001005 -
Sebi997g00007 237 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Sebi997g00007 237 CDD SANT 16 61 IPR001005 -
Sebi997g00007 237 Gene3D - 14 66 - -
Sebi997g00007 237 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 82 200 - -
Sebi997g00007 237 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sebi997g00007 237 SUPERFAMILY Homeodomain-like 14 94 IPR009057 -
Sebi997g00007 237 FunFam MYB-related transcription factor 13 66 - -
Sebi997g00007 237 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi997g00007 Sebi-Chr997 190008 192071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi997g00007 1 143 MYB Transcription Factor Family AT2G31180 41.975 6.28e-35 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi997g00007 Myb_DNA-binding 2.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi997g00007 K09422 - gmx:778184 219.164