Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi997g00006 ATGGCGAGAACCCCTTCTTGTGACAAAAATGGACTGAGAAAGGGTACTTGGACTGCAGAAGAAGATAGGAAGTTAATTGCTTATGTCACTAGGTATGGCTGCTGGAATTGGCGCCAACTTCCCAGGTTTGCAGGTCTGCAGAGGTGTGGGAAAAGTTGCAGATTGAGGTGGATGAATTATCTAAGGCCTAATATCAAAAGAGGGAACTTCACTCAACAAGAAGAGGAATGCATCATCAGAATGCACAAAAAACTGGGCAATAGATGGTCTGCCATTGCGGCTGAATTGCCTGGAAGAACAGATAATGAAGTAAAGAATCATTGGCATACCACACTCAAGAAGAGAGTTGCAAATGAGAAAGCAAATAAAGCTTCTAAATCAAAAGATGTTGAATCCACTCCAGGGAGGGAATCGGTGATGAACAATGTTCCTGTTTTTCAAGTTACTCTTCCAACTACTTCCCATATGTCAGAAATCACTGGTCCATTATCCCCATTTTCATCCTCCAGCGAATTCTCTTCCGTAACTTCAGATCACACTTCTGCTGCCAGTAATGGAAATTTGTTGCTTGAAGATGATGACTTCAGTTTTCTGGATGCATATGCAGAGACTGTGGATATTGAAACTTTCTGGACAGAGTCATTACTAGCTGATATTTCATCCACTACACCAAGTGAAACAGTGCCAGGGGATCTTACTTGTGCTATTCCAAATCCAGATACTGCTCAGATCTTTGATCCTTGTGTATTGTCTCCCAATCAATCGTCCAGTGAAAGCTTGGTTTTGGAGAATGACTTTGGCAACTTTCTGGATGCATGCACAGAGCCGACAATTGATAGTTTCTGGGGACAGCAATATGTGGCTGACATGTCCCACACTCCAAGCGAACTGCTGTCACCGTTGCCGGCTGAATTTGATTATTGTTCTACGATATATGATGCAGACCTTTGGAGTCAAAATAATTTGTATGATGGAAATCTTAGCTTATTCTAA 993 0.4199 MARTPSCDKNGLRKGTWTAEEDRKLIAYVTRYGCWNWRQLPRFAGLQRCGKSCRLRWMNYLRPNIKRGNFTQQEEECIIRMHKKLGNRWSAIAAELPGRTDNEVKNHWHTTLKKRVANEKANKASKSKDVESTPGRESVMNNVPVFQVTLPTTSHMSEITGPLSPFSSSSEFSSVTSDHTSAASNGNLLLEDDDFSFLDAYAETVDIETFWTESLLADISSTTPSETVPGDLTCAIPNPDTAQIFDPCVLSPNQSSSESLVLENDFGNFLDACTEPTIDSFWGQQYVADMSHTPSELLSPLPAEFDYCSTIYDADLWSQNNLYDGNLSLF 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi997g00006 330 MobiDBLite consensus disorder prediction 118 137 - -
Sebi997g00006 330 CDD SANT 69 112 IPR001005 -
Sebi997g00006 330 Gene3D - 68 137 - -
Sebi997g00006 330 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Sebi997g00006 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Sebi997g00006 330 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sebi997g00006 330 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Sebi997g00006 330 FunFam MYB-related transcription factor 13 66 - -
Sebi997g00006 330 CDD SANT 16 61 IPR001005 -
Sebi997g00006 330 Gene3D - 14 66 - -
Sebi997g00006 330 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sebi997g00006 330 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 208 - -
Sebi997g00006 330 SMART sant 13 63 IPR001005 -
Sebi997g00006 330 SMART sant 66 114 IPR001005 -
Sebi997g00006 330 MobiDBLite consensus disorder prediction 118 133 - -
Sebi997g00006 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Sebi997g00006 330 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi997g00006 Sebi-Chr997 174615 175879 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi997g00006 1 221 MYB Transcription Factor Family AT2G31180 45.701 6.04e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi997g00006 Myb_DNA-binding 7.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi997g00006 K09422 - gmx:100777107 377.867