Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi997g00001 ATGGTTAGAACCCCTCTCTGCGACAAAAGTGGACTGAAGAAAGGAACATGGACTCCAGAGGAAGACCGAAAGTTAATTGCTTACGTTACTAGGTACGGCCACTGGAATTGGCGCCAACTGCCCAAGTTTGCAGGTCTTGCTAGGTGTGGAAAGAGCTGCAGATTGAGGTGGCTGAATTATTTAAGGCCAGGCATCAAAAGAGGCAACTATACTCGTGAAGAAGAAGACACCATTGTCAAACTGCACGCATTGCTTGGAAATAGATGGTCAACAATTGCTTCTTACTTACCTGGAAGATCAGACAACGAGATAAAAAACCACTGGAACGCCCATCTTAAGAAGCGGTTTCAAGTTCAACACAATTCAGTAACAAATGAAAAAGATGAAAACTCCAACTCAAACCATCACTCCCCAGTTGAATCCACCAACCAAGAGAAGGACTCTGTGGAAATTGCTGGCCCTTCCCAAGATACTAATAATTACCAGACCCCTGATCATGCTTCTCCATCGTTGAATGATTTTTTCTTCACAACAACGGAACAAATTGCACCATTCAATGATGACGAGAATTTATCGCTTCTTGATGACTTTGCTAACTTCAATTTTGTGGACTCACACAATGATCCTATAAGCGCATATTCTTGGACAGAACTCAATGTGCCTGACATTTCCTACTTCCCAGGAGAATTACTGGCACCTTTCGTTACTGAACCCGAATCTTTCTATCCAACTTTTGATACACTGCTTTGGG 751 0.4274 MVRTPLCDKSGLKKGTWTPEEDRKLIAYVTRYGHWNWRQLPKFAGLARCGKSCRLRWLNYLRPGIKRGNYTREEEDTIVKLHALLGNRWSTIASYLPGRSDNEIKNHWNAHLKKRFQVQHNSVTNEKDENSNSNHHSPVESTNQEKDSVEIAGPSQDTNNYQTPDHASPSLNDFFFTTTEQIAPFNDDENLSLLDDFANFNFVDSHNDPISAYSWTELNVPDISYFPGELLAPFVTEPESFYPTFDTLLW 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi997g00001 250 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sebi997g00001 250 CDD SANT 69 112 IPR001005 -
Sebi997g00001 250 SMART sant 13 63 IPR001005 -
Sebi997g00001 250 SMART sant 66 114 IPR001005 -
Sebi997g00001 250 Gene3D - 68 144 - -
Sebi997g00001 250 CDD SANT 16 61 IPR001005 -
Sebi997g00001 250 MobiDBLite consensus disorder prediction 135 164 - -
Sebi997g00001 250 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Sebi997g00001 250 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Sebi997g00001 250 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Sebi997g00001 250 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Sebi997g00001 250 Gene3D - 7 66 - -
Sebi997g00001 250 FunFam MYB-related transcription factor 13 66 - -
Sebi997g00001 250 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 168 - -
Sebi997g00001 250 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Sebi997g00001 250 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sebi997g00001 250 MobiDBLite consensus disorder prediction 123 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi997g00001 Sebi-Chr997 1462 2539 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi997g00001 1 188 MYB Transcription Factor Family AT2G31180 52.632 8.32e-61 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi997g00001 Myb_DNA-binding 4e-13 CL0123