Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi994g00008 ATGGACACAACGTATAAACCTGAGGCAGAAGCAACTAATGCTGTTAGAGCTACTTATAAAGAAACGCTACAGACAAATGGAAAAAGGCTCCTGACAGAGCGCAAAGACATCAAAGATTTGGAGGTTATTGAAAAAAATGAAATTCCTGCAGTCAAGCAATATATTCCTGTCATGCCTAACCTTGCACCAAGTCATAATGCTTCAACATCAACAACAATGGTAGAAACTAGAGGAATAGCAGGGAAAGACAGATCTGGTGGGGAACTTCCTCAGAGTTCTACTACACACAAGGAAGTGCAGAAAGAGTGGACTTGTGCTTTATGTCAGGTAACAGCATCGTGTGAGCAAGACTTGAATTCTCACCTGCATGGAAGGAGACACAGGGATGCTTCTATAGCTCTGAAAGCAAAGACTAAAGCTGCTTCAAAGAAGCTGAAAATCAATCAGTCCAAAGAGGAATTGAAACAGAAGAACATTAACAACCAGCTAAATTCCAAGACCAAGAATGGAGGAGAGAATATGTTAACAAGGGGTTGA 537 0.4097 MDTTYKPEAEATNAVRATYKETLQTNGKRLLTERKDIKDLEVIEKNEIPAVKQYIPVMPNLAPSHNASTSTTMVETRGIAGKDRSGGELPQSSTTHKEVQKEWTCALCQVTASCEQDLNSHLHGRRHRDASIALKAKTKAASKKLKINQSKEELKQKNINNQLNSKTKNGGENMLTRG 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi994g00008 178 MobiDBLite consensus disorder prediction 140 178 - -
Sebi994g00008 178 Gene3D Classic Zinc Finger 88 131 - -
Sebi994g00008 178 SUPERFAMILY beta-beta-alpha zinc fingers 89 137 IPR036236 -
Sebi994g00008 178 PANTHER OS06G0651300 PROTEIN-RELATED 72 168 - -
Sebi994g00008 178 MobiDBLite consensus disorder prediction 154 178 - -
Sebi994g00008 178 Pfam Zinc-finger of C2H2 type 103 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi994g00008 Sebi-Chr994 195333 197729 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi994g00008 103 170 C2H2 Transcription Factor Family AT2G19380 34.667 3.72e-07 47.4