Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi994g00005 ATGGCGTCACACTCACAGTACCCACCCGACTTAGATTCCGACTCCGTGGCTTCCTCCCCTCGCTCCGACCACTTCCACGAATCGCCGCCACGTGTCCGATTCATGTGCAGCTTCGGCGGCAAGATCCTCCCCCGCCCCCACGACAACCAGCTCCGTTACGTCGGCGGCGATACCCGAATCGTCGCCGTCAACCGCTCCATCTCCTTCTCCGCTCTCATCCTCAAACTCTCTAAACTCTCAGGCATGAGTAATATAACTGCGAAGTACCAGCTTCCCAACGAGGATCTCGACGCGTTGATCTCTGTTACGACGGACGAAGACGTGGAGAACATGATGGACGAGTACGACCGCGTCGCACAGAATCATAACCCGCGATCGGCTCGGCTTCGGCTCTTCCTTTTCCCCGAAGGAGAAGATTCTAGAGCCAACAGCATCAGCTCGCTCCTTAACGGCTCAACTAACCGCGAGAATTGGTTCCTCGATGCCTTAAACGGCGGCGTTTCGGGGCTCGAACGAGGTCGCTCTGAAGCCTCTTCTATGGTTTCGGAAGTACCCGATTATCTCTTCGGGTTGGATAACTCCGAAGAAACACACTCCCAAAGTCACCAACACCGCGAGCCTCGACCCAAGGAACGACTCGTTCTCCAAGATAACGTTTCCGTTTCGGATCCGGGTTCTCCCGCCCCGGTTGTATCATCCCCGTTTTGTTCCACGTCATCAGCGCCTTGCGTGCCTACTATCCCGAACCTTCCCCCGGTTAAAACCAAACCCGAAAACCCAGTTCTTGACCCTGTGATCAAGGAAAATCAACTAGAAGCTGAAACGGGTGGGCAACCGCAACCGAATCCGAATCCGAATCCGTACCAGAGTAGCCCTGTAGTACACTATCCCCCAGAAGCTGCTTACTCGGGTCATTCTGCAGTTCCTGTTTACTATGTTTCGGGTCCGGCTCAACCCGGAACTGTACCGGTCAACCCGGTACCCATGCAGGCACACTATCCCTTTGTTCAACAACCATACCACGCAATGATGCCAACTCAAGTTCCAATCGGGTACCATCATTTTGTTCAGGGTTCGGGTCAAGTATATGGTGCAGGGCCAGGGGTCAGGCATGTGACCCCGATGCATCCATATAGTCCGTCGCCGGCGGTGGTTCATGACGGTTTGAAACAACAGGTGTATCAAGCCGTGCCGAATTCCGGTTCTGTTCCGGTTTACCCGGCGATGGCGATGACCGGTGGGGATGAACTGCAGAGAGGCGGAGCGGAATTTGGGTCGGGTCGGGGCACCAACTCGTTGAATAACTGA 1308 0.5512 MASHSQYPPDLDSDSVASSPRSDHFHESPPRVRFMCSFGGKILPRPHDNQLRYVGGDTRIVAVNRSISFSALILKLSKLSGMSNITAKYQLPNEDLDALISVTTDEDVENMMDEYDRVAQNHNPRSARLRLFLFPEGEDSRANSISSLLNGSTNRENWFLDALNGGVSGLERGRSEASSMVSEVPDYLFGLDNSEETHSQSHQHREPRPKERLVLQDNVSVSDPGSPAPVVSSPFCSTSSAPCVPTIPNLPPVKTKPENPVLDPVIKENQLEAETGGQPQPNPNPNPYQSSPVVHYPPEAAYSGHSAVPVYYVSGPAQPGTVPVNPVPMQAHYPFVQQPYHAMMPTQVPIGYHHFVQGSGQVYGAGPGVRHVTPMHPYSPSPAVVHDGLKQQVYQAVPNSGSVPVYPAMAMTGGDELQRGGAEFGSGRGTNSLNN 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi994g00005 435 Pfam PB1 domain 47 135 IPR000270 GO:0005515
Sebi994g00005 435 PANTHER OS05G0427100 PROTEIN-RELATED 14 366 - -
Sebi994g00005 435 MobiDBLite consensus disorder prediction 1 16 - -
Sebi994g00005 435 SMART PB1_new 46 136 IPR000270 GO:0005515
Sebi994g00005 435 CDD PB1_UP2 35 134 - -
Sebi994g00005 435 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 51 136 - -
Sebi994g00005 435 SUPERFAMILY CAD & PB1 domains 47 143 - -
Sebi994g00005 435 MobiDBLite consensus disorder prediction 1 28 - -
Sebi994g00005 435 MobiDBLite consensus disorder prediction 273 299 - -
Sebi994g00005 435 Gene3D - 52 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi994g00005 Sebi-Chr994 129038 130449 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi994g00005 26 171 MAP Kinase Kinase Kinase AT5G57610 45.270 4.00e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi994g00005 - - gmx:100806717 670.233