Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi994g00002 ATGAACAAAGTTCTCATTTTTATTTTTGCTTTTGCTTTTCTAACACCAACCCTTCATAAAATTTCATATGCAGCTGATACCTTAACTCCAACATCTTCCTCTTCCATCATAGATGGCCAAGAACTCATTTCTGCAGGACAAAATTTCTCTCTTGGATTCTTCAGTCCAGGAAGCTCTAAAAGGCGTTACTTAGGAATATGGTACAAGAATATCATGCCTCAAACAGTTGTTTGGGTTGCAAACAGAGAGAAACCACTAAATGACTCAAGTGGAAACTTAACCATTGGTGCTGATGGGAATATTGTACTTGTTGATGGAGCAGGCAACAAAATATGGTCTACAAAATCATCAAGATCAATTCAAGAGCCAATTGCAAAGCTATTAGATTCTGGAAACTTGGTCTTGATGGATGCAAAGAAGTCAAAGAACAGTGATTCTTATAGTTACATTTGGCAAAGCTTTGATTATCCAACAGACACAATGTTACCAGGAATGAAGTTGGGTTGGGATAAGACCTCAGGTATTGATAGATATTTGACTTCATGGAAAAGTGCTGATGACCCTTCTCCTGGAAACTTTACTTACAGGTTTGAGCACAATGAATTTCCTGAGTTGGTAATCTGGCAGGGAATGAACATCACATTCAGAAGTGGGATTTGGGATGGCCTTCGTTTTAATTCAGATGATTGGAAATCATTTATAGGAATCACAGCCTTCAAGCCACAACTTTCAGTAACCAAAAATGAGGTAGTGTATTGGGATGAACCTGGTGATAGATTGTCAAGGTTTGTGATGAGGGATGATGGAATGCTTAAAAGGATTAATGATGTACCTGTTTATTGTGATTGTTTGAAAGGCTTCAAACCTAAATCACAGGAAGAATGGAATTCAATTAATTACTCTGGTGGGTGTATCAGGAGAACACCATTAAACTGCACTCAAGATGACAGGTTTCAAAAATTAAGCTGGGTGAAATTGCCCATGTTGTTGCAATTTTGGACAAATAATAGCATGAGTCTTGAAGAATGTGAGGTGGAGTGCTTAAAGAATTGTTCTTGCACTGCATATGCAAATTCTGGCATGAATGGAGGGCCCCATGGCTGTTTGCTTTGGGTTGGGGACTTGATTGACATAAGGCAGCTTATAAATGAAGAGGGTGTGCAACTTGATCTTTATCTAAGGTTAGCCTCTTCAGAAATAGAGTCCACTACTACTGCTGGTAAAAGGAGAAATGTGGCACTGATTATTTCATCAATTTTGGCATTGGTTCTTTTGTGTATCATTTTCTACTTTTATAAGAAGTATACAAAACGGAAGACCACTACTGATTTGGTCACAGGACATACAAATCAGGATGAAGATCAAGCATCACCTCTTTTTGATATAGATACTATTCTAGCTGCTACAAACAATTTTTCTATTGAGAACAAGATTGGGGAAGGGGGCTTTGGTCCAGTATACAAGGGTATATTGCCTCAAGGACAAGAAATAGCTGTGAAAAGGCTATCAAAAACCTCAAAACAAGGAATCTCAGAGTTTATGAATGAAGTTGGATTGGTAGCAAAACTTCAACACCGTAATCTTGTGAGTGTATTAGGTGGATGCACTCAAGGAAATGAAAGAATGTTGGTGTATGAATACATGCCTAATGGTAGTTTGAACCACTTCATTTTTGATCACATAGAAGGAAAATTTTTGCAGTGGAGGAAACGATATCAAATTATTATGGGGATTGCTAGAGGACTACTTTACCTTCATCAAGATTCAAAACTAACCATCATTCATAGGGATCTAAAAACAAGTAATATTTTACTTGATAGTGAATTGAACCCCAAAATTTCTGATTTTGGTGTGGCCCACATCTTTGAAGGAAATCAATCTGCAGTAACAACAAATAAAATTGTTGGGACAGTTGGTTACATGTCCCCTGAGTATGCAGTAGATGGGATCCTTTCCCTTAAGTCTGATGTATTTAGCTTTGGAGTTATAATGTTAGAGATATTGAGTGGCATCAGAAATCATAACTTCAAACATTCAAATCATCATAATCTGTTGGGGCAGGCTTGGACACTATGGAAAGAGGGAAGAGCAGTGGAATTCATGGATGTTAATTTAGATCTTACAACTATTCCATCTGAATTACTGAGGTGCCTGCAAATTGGTCTGTTGTGTGTTCAAAAGTTCCCTGAAGACAGACCAGATATGTCATCTGTGGTTTTCATGTTGGGCAATGAAAGTATTGCACTTTCCCAACCAAAGAAGCCTGGTTTCTTTGAAGAAGAGTTTGAGTTTAATGAGTACAGTGAAAATGATTGTTTTAGCAATAATGCTATGACTATTACCCTATTGGAAGCTCGAAATTAG 2364 0.3756 MNKVLIFIFAFAFLTPTLHKISYAADTLTPTSSSSIIDGQELISAGQNFSLGFFSPGSSKRRYLGIWYKNIMPQTVVWVANREKPLNDSSGNLTIGADGNIVLVDGAGNKIWSTKSSRSIQEPIAKLLDSGNLVLMDAKKSKNSDSYSYIWQSFDYPTDTMLPGMKLGWDKTSGIDRYLTSWKSADDPSPGNFTYRFEHNEFPELVIWQGMNITFRSGIWDGLRFNSDDWKSFIGITAFKPQLSVTKNEVVYWDEPGDRLSRFVMRDDGMLKRINDVPVYCDCLKGFKPKSQEEWNSINYSGGCIRRTPLNCTQDDRFQKLSWVKLPMLLQFWTNNSMSLEECEVECLKNCSCTAYANSGMNGGPHGCLLWVGDLIDIRQLINEEGVQLDLYLRLASSEIESTTTAGKRRNVALIISSILALVLLCIIFYFYKKYTKRKTTTDLVTGHTNQDEDQASPLFDIDTILAATNNFSIENKIGEGGFGPVYKGILPQGQEIAVKRLSKTSKQGISEFMNEVGLVAKLQHRNLVSVLGGCTQGNERMLVYEYMPNGSLNHFIFDHIEGKFLQWRKRYQIIMGIARGLLYLHQDSKLTIIHRDLKTSNILLDSELNPKISDFGVAHIFEGNQSAVTTNKIVGTVGYMSPEYAVDGILSLKSDVFSFGVIMLEILSGIRNHNFKHSNHHNLLGQAWTLWKEGRAVEFMDVNLDLTTIPSELLRCLQIGLLCVQKFPEDRPDMSSVVFMLGNESIALSQPKKPGFFEEEFEFNEYSENDCFSNNAMTITLLEARN 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi994g00002 787 Gene3D Phosphorylase Kinase; domain 1 432 547 - -
Sebi994g00002 787 PIRSF SRK 1 279 IPR024171 GO:0004674
Sebi994g00002 787 PIRSF SRK 273 786 IPR024171 GO:0004674
Sebi994g00002 787 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 548 750 - -
Sebi994g00002 787 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 188 IPR036426 -
Sebi994g00002 787 CDD STKc_IRAK 478 742 - -
Sebi994g00002 787 Pfam PAN-like domain 312 378 IPR003609 -
Sebi994g00002 787 CDD PAN_AP_plant 308 396 - -
Sebi994g00002 787 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 154 - -
Sebi994g00002 787 ProSiteProfiles Bulb-type lectin domain profile. 27 148 IPR001480 -
Sebi994g00002 787 CDD B_lectin 33 157 IPR001480 -
Sebi994g00002 787 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 733 - -
Sebi994g00002 787 Gene3D Transferase(Phosphotransferase) domain 1 548 754 - -
Sebi994g00002 787 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 433 547 - -
Sebi994g00002 787 ProSiteProfiles PAN/Apple domain profile. 312 396 IPR003609 -
Sebi994g00002 787 SMART ntp_6 313 395 IPR003609 -
Sebi994g00002 787 ProSiteProfiles Protein kinase domain profile. 472 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi994g00002 787 SMART blect_4 33 157 IPR001480 -
Sebi994g00002 787 SUPERFAMILY Protein kinase-like (PK-like) 456 742 IPR011009 -
Sebi994g00002 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 593 605 IPR008271 GO:0004672|GO:0006468
Sebi994g00002 787 SMART serkin_6 472 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi994g00002 787 Pfam D-mannose binding lectin 75 183 IPR001480 -
Sebi994g00002 787 Pfam Protein tyrosine and serine/threonine kinase 473 739 IPR001245 GO:0004672|GO:0006468
Sebi994g00002 787 Gene3D - 20 154 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi994g00002 Sebi-Chr994 35157 38837 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi994g00002 412 757 Receptor kinase-like Gene Family AT4G23230 51.585 3.38e-113 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi994g00002 PK_Tyr_Ser-Thr 9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi994g00002 - - gmx:102669607 1226.85