Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi993g00002 ATGTTACATTTTTGTGCCACAACAATTGTGAAAGATGCAGGTTGTGATGAAAGCATCATTCCTCACCATGTTTTTGAATTTGTTAATCTTGATGATTTACAAAGTCGGTGTGGAAAGGATGTGTTGACAGATGTGATTGGAGTTATCACAAAAGTTGGTCCAATTGAAGAGAAGAGGACTATTGGAGGCAGCGTTGATACCTTGACACTTCATTTACAAGACATAAGGGGAAATAGGGTTAAAGTGACAATATGGGATGAATATGTAAAGCTATTTGAGCAGAAATTGAAAGAAAATGTGTCTAAAGATCCTCAAGTCACTGTTGCAATTTTCACATCAACTATAATTAAAGAGTTTCGAGGGGATTCAAGTGATGAACCTATAGTTGGTAACTTTGAGGTGTCAAAGGATGGTGTCTGTCCTAAAACAGTGAAGACTATAGCTGAACTTCTGTCCATGGCAAGTTTAAAGAGTAATACGAATGATGTGTATTGCTGTGCTGCTACTGTAAACGATATCTTGCTGAAAAATGGTTGGAATTATGTTTGTTGCCCTCATTGCAAAAAAAAGGCTAATAGGACAACTACAAATTTCAGTTGTCAACATTGCCACAAAGTTGTTGAGTATCCAATGACAAGGTTGCGTTTGGAGCTTGATGTCAAAGATTCAACAGATTCTACCATATTTGTTCTATTTCATGAAGTTGCTGAACAATTAACACAATTGAACTTAGGAGACCATGCCACAACCTTTGAAAATGAAAATGGTGATGATTTGAACCTGCCACCCCAACTCCTAAAAATCATAGGTTGCAGTCAGATGATGAAGAATCATGATACAAGCAACGAAAATGAGATTATGGAAGAATTAGATGAATGA 879 0.3652 MLHFCATTIVKDAGCDESIIPHHVFEFVNLDDLQSRCGKDVLTDVIGVITKVGPIEEKRTIGGSVDTLTLHLQDIRGNRVKVTIWDEYVKLFEQKLKENVSKDPQVTVAIFTSTIIKEFRGDSSDEPIVGNFEVSKDGVCPKTVKTIAELLSMASLKSNTNDVYCCAATVNDILLKNGWNYVCCPHCKKKANRTTTNFSCQHCHKVVEYPMTRLRLELDVKDSTDSTIFVLFHEVAEQLTQLNLGDHATTFENENGDDLNLPPQLLKIIGCSQMMKNHDTSNENEIMEELDE 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi993g00002 292 CDD RPA1_DBD_B_like 44 121 - -
Sebi993g00002 292 Gene3D - 20 133 IPR012340 -
Sebi993g00002 292 SUPERFAMILY Nucleic acid-binding proteins 144 257 IPR012340 -
Sebi993g00002 292 Pfam Replication protein A OB domain 37 123 IPR031657 -
Sebi993g00002 292 Gene3D - 134 289 IPR012340 -
Sebi993g00002 292 SUPERFAMILY Nucleic acid-binding proteins 25 122 IPR012340 -
Sebi993g00002 292 Pfam Replication factor-A C terminal domain 166 245 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi993g00002 Sebi-Chr993 67587 69579 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi993g00002 16 255 Core DNA Replication Machinery Family AT5G45400 24.460 9.54e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi993g00002 - - mtr:120580096 266.929