LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi992g00002	ATGGCCGACAAGCAGCCCCCATTGAACGGTGCCTTCTACGGGCCCGCCATTCCGCCGGCAGCGCAACCCCATCACCGCGGCAGGAACTGCTGCTGCTGCCTCTTTGGCGTCTTCTGGAAGCTTCTCATTGCGCTCATCGTCCTCTTTGGCCTCGCAATCCTGATCTTCTATCTCATCGTTCAACCTCGCTTATTCAAGTTCTATGTCAATAAAGCAGAGCTAACCCAATTTGACTACACCGACAACACACTCCATTACAACATGGTGCTCAACTTCACCGCACGCAACCCCAACAAAAAGCTTAGCATCTACTACGACAAAGTGGAGGCCTTGGCATTCTATGAGGGGTCAAGGTTCGCCAATGCTGACGTCATCACCCATATGAACTCTTTCCGTCAGTACAAGAAGAGCAGCGACCCCATGAGTGGCGTTTTCAAAGGACAGCAATTGTTGCTTCTTGACAATGATCAGGTTTCTGAATTCAACATAGACAAGAGTGTTGGGGTTTATGACATCTATGTGAAGCTCTACTTCAGAATTAGGTTCAGGCTCGGGGACTCAATTTCCCACACATACAAGCCCAAAGTCAAATGTCACCTCAAGGTTCCCTTCAACTCTAACAATACATTCACATTTTATGCGACCACCAAGTGCGATGTTGATTAA	666	0.4835	MADKQPPLNGAFYGPAIPPAAQPHHRGRNCCCCLFGVFWKLLIALIVLFGLAILIFYLIVQPRLFKFYVNKAELTQFDYTDNTLHYNMVLNFTARNPNKKLSIYYDKVEALAFYEGSRFANADVITHMNSFRQYKKSSDPMSGVFKGQQLLLLDNDQVSEFNIDKSVGVYDIYVKLYFRIRFRLGDSISHTYKPKVKCHLKVPFNSNNTFTFYATTKCDVD	221

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi992g00002	221	PANTHER	OS05G0367900 PROTEIN	29	206	IPR044839	GO:0098542
	Sebi992g00002	221	Pfam	Late embryogenesis abundant protein	92	198	IPR004864	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi992g00002	Sebi-Chr992	21959	22624	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi992g00002	59	209	SNARE and Associated Proteins	AT1G32270	34.839	5.68e-20	84.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi992g00002	-		-	gmx:100807701	373.244