Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi991g00003 ATGACTCAGTGCAGTGACCCTGAAAACATCATAGTGGAGGGACGAAAGGACAGTTTAATTAGAACTTGTCCCACTTGTGGTCATCATATCAAATGTCAAGAACAGGGTGGTGGAATTCATGATTTACCTGGATTGCCTGCTGGAGTGAAGTTTGATCCAACAGATCAAGAGATTCTTGAACATTTGGAAGCGAAGGTGCGTTCTGATATTCATAAGCTTCACCCACTAATTGATGAGTTCATACCTACTCTTGAAGGCGAGAATGGAATTTGCTATACTCATCCAGAGAAGTTGCCAGGAGTTAGCAAAGATGGCCTGATCCGCCATTTCTTTCACAGGCCTTCCAAGGCATATACAACAGGAACAAGGAAAAGGAGAAAGGTTCACTCTGATGAGGATGGTAGTGAGACACGTTGGCACAAAACAGGTAAGACTAGGCCAGTCTACAACAATACCAAGTTAAAAGGGTACAAGAAAATCCTTGTACTTTACACTAACTATGGAAAGCAAAGAAAGCCAGAGAAAACAAATTGGGTCATGCACCAATACCACCTTGGAAGTGATGAAGAGGAGAAAGAAGGTGAATTAGTGGTCTCCAAAGTTTTCTATCAAACCCAACCCAGACAATGTGGTTCACTAATGAAAGACTCAGTTACTGGAAAACACAACATCAAGGGTCAAAGCATGCATGAGGTTATCAATAACAAAAACAATAATGGGTTTGTTGAGTACTACCATTCAAATTTCATATCTTTTGATCAAGGGAGCCAACATAGATCTAACACTGCTCAAGTAATTCCTCATTTTCCTGTCCATGATGCTGCTCCTTATATTCCTTGA 840 0.4083 MTQCSDPENIIVEGRKDSLIRTCPTCGHHIKCQEQGGGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHSDEDGSETRWHKTGKTRPVYNNTKLKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGSDEEEKEGELVVSKVFYQTQPRQCGSLMKDSVTGKHNIKGQSMHEVINNKNNNGFVEYYHSNFISFDQGSQHRSNTAQVIPHFPVHDAAPYIP 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi991g00003 279 MobiDBLite consensus disorder prediction 124 143 - -
Sebi991g00003 279 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 19 226 IPR044799 GO:0003700
Sebi991g00003 279 MobiDBLite consensus disorder prediction 119 147 - -
Sebi991g00003 279 FunFam NAC domain-containing protein 73 54 208 - -
Sebi991g00003 279 ProSiteProfiles NAC domain profile. 45 204 IPR003441 GO:0003677|GO:0006355
Sebi991g00003 279 Gene3D NAC domain 54 208 IPR036093 GO:0003677|GO:0006355
Sebi991g00003 279 Pfam No apical meristem (NAM) protein 46 185 IPR003441 GO:0003677|GO:0006355
Sebi991g00003 279 SUPERFAMILY NAC domain 40 204 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi991g00003 Sebi-Chr991 72284 74032 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi991g00003 21 279 NAC Transcription Factor Family AT4G28500 63.214 3.93e-119 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi991g00003 NAM 1.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi991g00003 - - gmx:100797459 536.184