Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi98g00017 ATGGAGAAGTACACATTAATAGCTATTATTGGAATCAAGGATCCAGTGAGACCTGGAGTAAAAGAAGCTGTTAAGACTTGTTTAGAAGCTGGGATTACCGTTAGAATGGTAACTGGTGACAACATAAATACTGCTAAAGCGATTGCTAGAGAATGTGGCATCTTGACAGATGGATTGGCGATAGAGGGACCAGATTTCCAGAAAAAGACCCAGCGAGAAATGAAAGAGATAATACCAAAAATACAGGCAATGGCTCGATCCTTGCCTCTTGACAAGCACACCTTAGTGACCCATTTGAGGAATGACTTTAATGAAGTTGTGGCAGTAACTGGTGATGGGACCAATGATGCTCCAGCGTTGCATGAGGCTGATATTGGACTTGCTATGGGTATTGCTGGGACTGAGGTTTGTCACAGGCACAATCCGTGCATCATTTATCATTCCATCTAA 450 0.4267 MEKYTLIAIIGIKDPVRPGVKEAVKTCLEAGITVRMVTGDNINTAKAIARECGILTDGLAIEGPDFQKKTQREMKEIIPKIQAMARSLPLDKHTLVTHLRNDFNEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVCHRHNPCIIYHSI 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi98g00017 149 FunFam copper-transporting ATPase 1 isoform X2 10 55 - -
Sebi98g00017 149 SUPERFAMILY HAD-like 5 139 IPR036412 -
Sebi98g00017 149 Gene3D - 3 15 IPR023299 GO:0000166
Sebi98g00017 149 PANTHER CATION TRANSPORTING ATPASE 3 139 - -
Sebi98g00017 149 Pfam haloacid dehalogenase-like hydrolase 6 124 - -
Sebi98g00017 149 Gene3D - 16 137 IPR023214 -
Sebi98g00017 149 PRINTS P-type cation-transporting ATPase superfamily signature 30 40 - -
Sebi98g00017 149 PRINTS P-type cation-transporting ATPase superfamily signature 8 19 - -
Sebi98g00017 149 PRINTS P-type cation-transporting ATPase superfamily signature 110 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi98g00017 Sebi-Chr98 517628 518160 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi98g00017 4 145 Primary Pumps ATPases AT4G37640 75.524 2.65e-68 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi98g00017 K01537 - gmx:100801260 243.817