Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi989g00004 ATGTCAATTTCAATGGATGACATCTTGAAGGAGTCAAATGTGGGTGACGAGGAGAGTACTTACATGAAGGAAATTTTGGTCGGAGAGGTGGTGGATAGTGAGAGGTGTGGGAGGGTTGATGGTTGGGTGGAATTTTTACCTTGTTGGGTTGTGGCAGTGACAATGAAGATGGGTTTTTGGACTATAAACGATGTTTCTGGATGTGGACAGAATGATGAAGGAAATTCTAATGAGAAATCGCAAAATGATAGTGATGAAGGTGGCTATGATGAAGAATATGAAAGCACAAATGAAGAAGGAGGGCTTGCAGGAAATGGTGATGAGGGCATTGCCATTGATGGCATACATGACTTTGCCAATATTAATTGGAAAACTCTTACCATGGAGGAGTTTATGAAATACCATTTTGCTGATCTTGAGGTTGCATTTAAGTGTTATAATTGGTATGCTAGACGAAAAGGATTTTCTGCGCGTAAGGACAAGGTTGGTAAGAACAAAGCTAAAGTTGTTATACGACAGATATTTGTGTGCTCTAGGGAAGGTTTTCCTAAAGTCAAGGAAGGAAGTTATAAAAGGGAACGAAGAAGAATTATAAGATGTGGATGTAAAGCACATTGCAAGATGAGGTTGAACGCTGATAATAATCGTTGGCATGTGACTTCATTTGTGGAAAACCACAATCATGCCATGTTGGAGCAGAGGTTCCATGGCATGCTACCGTCCCATAGGAGGATGGAGGAGCATGAAATAGAAGTCATGAACCAGATGAGAGGTGTTGGAATTAGCACGCCTAGCATATACCAAGCTTTTGCAAGTCAGACAGAAGGGATTAGAAAAATAGATCCTGCCATTTTTGTGAGACACAAGACAAATGATGATGGTAGACTACAACACCTATTCTGGTGTGATGGTGTTAATCACCATAATCAGACAACTATATTTGCATTTGCGGTTGTTTCAAATGAAACTGAGGACACGTATGTGTGGGTACTAGAACAATTTTTCAATGCCATGAAGGGGAAGTCTCCAAAATCTGTTATAACAGATGGTGATAGGGCCATGAGGAATGCTATCAGAATTGTTTTTCCTAATGCTACTCACAGGCTTTGTGAATGA 1116 0.4032 MSISMDDILKESNVGDEESTYMKEILVGEVVDSERCGRVDGWVEFLPCWVVAVTMKMGFWTINDVSGCGQNDEGNSNEKSQNDSDEGGYDEEYESTNEEGGLAGNGDEGIAIDGIHDFANINWKTLTMEEFMKYHFADLEVAFKCYNWYARRKGFSARKDKVGKNKAKVVIRQIFVCSREGFPKVKEGSYKRERRRIIRCGCKAHCKMRLNADNNRWHVTSFVENHNHAMLEQRFHGMLPSHRRMEEHEIEVMNQMRGVGISTPSIYQAFASQTEGIRKIDPAIFVRHKTNDDGRLQHLFWCDGVNHHNQTTIFAFAVVSNETEDTYVWVLEQFFNAMKGKSPKSVITDGDRAMRNAIRIVFPNATHRLCE 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi989g00004 371 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 129 370 IPR031052 GO:0006355
Sebi989g00004 371 Pfam MULE transposase domain 298 370 IPR018289 -
Sebi989g00004 371 MobiDBLite consensus disorder prediction 70 104 - -
Sebi989g00004 371 Pfam FAR1 DNA-binding domain 146 231 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi989g00004 Sebi-Chr989 63622 65528 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi989g00004 FAR1 7.7e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi989g00004 - - mtr:112417123 256.529